IDEAS home Printed from https://ideas.repec.org/a/bla/biomet/v79y2023i1p304-318.html
   My bibliography  Save this article

Spectra in low‐rank localized layers (SpeLLL) for interpretable time–frequency analysis

Author

Listed:
  • Marie Tuft
  • Martica H. Hall
  • Robert T. Krafty

Abstract

The time‐varying frequency characteristics of many biomedical time series contain important scientific information. However, the high‐dimensional nature of the time‐varying power spectrum as a surface in time and frequency limits its direct use by applied researchers and clinicians for elucidating complex mechanisms. In this article, we introduce a new approach to time–frequency analysis that decomposes the time‐varying power spectrum in to orthogonal rank‐one layers in time and frequency to provide a parsimonious representation that illustrates relationships between power at different times and frequencies. The approach can be used in fully nonparametric analyses or in semiparametric analyses that account for exogenous information and time‐varying covariates. An estimation procedure is formulated within a penalized reduced‐rank regression framework that provides estimates of layers that are interpretable as power localized within time blocks and frequency bands. Empirical properties of the procedure are illustrated in simulation studies and its practical use is demonstrated through an analysis of heart rate variability during sleep.

Suggested Citation

  • Marie Tuft & Martica H. Hall & Robert T. Krafty, 2023. "Spectra in low‐rank localized layers (SpeLLL) for interpretable time–frequency analysis," Biometrics, The International Biometric Society, vol. 79(1), pages 304-318, March.
  • Handle: RePEc:bla:biomet:v:79:y:2023:i:1:p:304-318
    DOI: 10.1111/biom.13577
    as

    Download full text from publisher

    File URL: https://doi.org/10.1111/biom.13577
    Download Restriction: no

    File URL: https://libkey.io/10.1111/biom.13577?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Robert Tibshirani & Michael Saunders & Saharon Rosset & Ji Zhu & Keith Knight, 2005. "Sparsity and smoothness via the fused lasso," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 67(1), pages 91-108, February.
    2. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    3. Robert T. Krafty, 2016. "Discriminant Analysis of Time Series in the Presence of Within-Group Spectral Variability," Journal of Time Series Analysis, Wiley Blackwell, vol. 37(4), pages 435-450, July.
    4. Davis, Richard A. & Lee, Thomas C.M. & Rodriguez-Yam, Gabriel A., 2006. "Structural Break Estimation for Nonstationary Time Series Models," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 223-239, March.
    5. Scott A. Bruce & Cheng Yong Tang & Martica H. Hall & Robert T. Krafty, 2020. "Empirical Frequency Band Analysis of Nonstationary Time Series," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 115(532), pages 1933-1945, December.
    6. Kun Chen & Kung‐Sik Chan & Nils Chr. Stenseth, 2012. "Reduced rank stochastic regression with a sparse singular value decomposition," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 74(2), pages 203-221, March.
    7. Claudia Kirch & Birte Muhsal & Hernando Ombao, 2015. "Detection of Changes in Multivariate Time Series With Application to EEG Data," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(511), pages 1197-1216, September.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Tutz, Gerhard & Pößnecker, Wolfgang & Uhlmann, Lorenz, 2015. "Variable selection in general multinomial logit models," Computational Statistics & Data Analysis, Elsevier, vol. 82(C), pages 207-222.
    2. Mkhadri, Abdallah & Ouhourane, Mohamed, 2013. "An extended variable inclusion and shrinkage algorithm for correlated variables," Computational Statistics & Data Analysis, Elsevier, vol. 57(1), pages 631-644.
    3. Yize Zhao & Matthias Chung & Brent A. Johnson & Carlos S. Moreno & Qi Long, 2016. "Hierarchical Feature Selection Incorporating Known and Novel Biological Information: Identifying Genomic Features Related to Prostate Cancer Recurrence," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(516), pages 1427-1439, October.
    4. Jian Guo & Elizaveta Levina & George Michailidis & Ji Zhu, 2010. "Pairwise Variable Selection for High-Dimensional Model-Based Clustering," Biometrics, The International Biometric Society, vol. 66(3), pages 793-804, September.
    5. Lu Tang & Ling Zhou & Peter X. K. Song, 2019. "Fusion learning algorithm to combine partially heterogeneous Cox models," Computational Statistics, Springer, vol. 34(1), pages 395-414, March.
    6. Molly C. Klanderman & Kathryn B. Newhart & Tzahi Y. Cath & Amanda S. Hering, 2020. "Fault isolation for a complex decentralized waste water treatment facility," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 69(4), pages 931-951, August.
    7. Tomáš Plíhal, 2021. "Scheduled macroeconomic news announcements and Forex volatility forecasting," Journal of Forecasting, John Wiley & Sons, Ltd., vol. 40(8), pages 1379-1397, December.
    8. Loann David Denis Desboulets, 2018. "A Review on Variable Selection in Regression Analysis," Econometrics, MDPI, vol. 6(4), pages 1-27, November.
    9. Takumi Saegusa & Tianzhou Ma & Gang Li & Ying Qing Chen & Mei-Ling Ting Lee, 2020. "Variable Selection in Threshold Regression Model with Applications to HIV Drug Adherence Data," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 12(3), pages 376-398, December.
    10. Ngai Hang Chan & Chun Yip Yau & Rong-Mao Zhang, 2014. "Group LASSO for Structural Break Time Series," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(506), pages 590-599, June.
    11. Devriendt, Sander & Antonio, Katrien & Reynkens, Tom & Verbelen, Roel, 2021. "Sparse regression with Multi-type Regularized Feature modeling," Insurance: Mathematics and Economics, Elsevier, vol. 96(C), pages 248-261.
    12. Korobilis, Dimitris, 2013. "Hierarchical shrinkage priors for dynamic regressions with many predictors," International Journal of Forecasting, Elsevier, vol. 29(1), pages 43-59.
    13. Luo, Chongliang & Liang, Jian & Li, Gen & Wang, Fei & Zhang, Changshui & Dey, Dipak K. & Chen, Kun, 2018. "Leveraging mixed and incomplete outcomes via reduced-rank modeling," Journal of Multivariate Analysis, Elsevier, vol. 167(C), pages 378-394.
    14. Fryzlewicz, Piotr, 2020. "Detecting possibly frequent change-points: Wild Binary Segmentation 2 and steepest-drop model selection," LSE Research Online Documents on Economics 103430, London School of Economics and Political Science, LSE Library.
    15. Cristiano Varin & Manuela Cattelan & David Firth, 2016. "Statistical modelling of citation exchange between statistics journals," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 179(1), pages 1-63, January.
    16. Sakyajit Bhattacharya & Paul McNicholas, 2014. "A LASSO-penalized BIC for mixture model selection," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 8(1), pages 45-61, March.
    17. Florian Ziel, 2015. "Iteratively reweighted adaptive lasso for conditional heteroscedastic time series with applications to AR-ARCH type processes," Papers 1502.06557, arXiv.org, revised Dec 2015.
    18. Dufays, Arnaud & Rombouts, Jeroen V.K., 2020. "Relevant parameter changes in structural break models," Journal of Econometrics, Elsevier, vol. 217(1), pages 46-78.
    19. Eric C. Chi & Genevera I. Allen & Richard G. Baraniuk, 2017. "Convex biclustering," Biometrics, The International Biometric Society, vol. 73(1), pages 10-19, March.
    20. Dong, Ruipeng & Li, Daoji & Zheng, Zemin, 2021. "Parallel integrative learning for large-scale multi-response regression with incomplete outcomes," Computational Statistics & Data Analysis, Elsevier, vol. 160(C).

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bla:biomet:v:79:y:2023:i:1:p:304-318. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Wiley Content Delivery (email available below). General contact details of provider: http://www.blackwellpublishing.com/journal.asp?ref=0006-341X .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.