IDEAS home Printed from https://ideas.repec.org/r/nat/nature/v467y2010i7312d10.1038_nature09326.html
   My bibliography  Save this item

Functional roles for noise in genetic circuits

Citations

Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
as


Cited by:

  1. Mohammad Soltani & Cesar A Vargas-Garcia & Duarte Antunes & Abhyudai Singh, 2016. "Intercellular Variability in Protein Levels from Stochastic Expression and Noisy Cell Cycle Processes," PLOS Computational Biology, Public Library of Science, vol. 12(8), pages 1-23, August.
  2. David Frigola & Laura Casanellas & José M Sancho & Marta Ibañes, 2012. "Asymmetric Stochastic Switching Driven by Intrinsic Molecular Noise," PLOS ONE, Public Library of Science, vol. 7(2), pages 1-7, February.
  3. Clive G Bowsher & Margaritis Voliotis & Peter S Swain, 2013. "The Fidelity of Dynamic Signaling by Noisy Biomolecular Networks," PLOS Computational Biology, Public Library of Science, vol. 9(3), pages 1-9, March.
  4. Margaritis Voliotis & Philipp Thomas & Ramon Grima & Clive G Bowsher, 2016. "Stochastic Simulation of Biomolecular Networks in Dynamic Environments," PLOS Computational Biology, Public Library of Science, vol. 12(6), pages 1-18, June.
  5. Abhyudai Singh & Mohammad Soltani, 2013. "Quantifying Intrinsic and Extrinsic Variability in Stochastic Gene Expression Models," PLOS ONE, Public Library of Science, vol. 8(12), pages 1-12, December.
  6. Vera Bettenworth & Simon Vliet & Bartosz Turkowyd & Annika Bamberger & Heiko Wendt & Matthew McIntosh & Wieland Steinchen & Ulrike Endesfelder & Anke Becker, 2022. "Frequency modulation of a bacterial quorum sensing response," Nature Communications, Nature, vol. 13(1), pages 1-12, December.
  7. Gabriele Micali & Gerardo Aquino & David M Richards & Robert G Endres, 2015. "Accurate Encoding and Decoding by Single Cells: Amplitude Versus Frequency Modulation," PLOS Computational Biology, Public Library of Science, vol. 11(6), pages 1-21, June.
  8. Jessica A Lee & Siavash Riazi & Shahla Nemati & Jannell V Bazurto & Andreas E Vasdekis & Benjamin J Ridenhour & Christopher H Remien & Christopher J Marx, 2019. "Microbial phenotypic heterogeneity in response to a metabolic toxin: Continuous, dynamically shifting distribution of formaldehyde tolerance in Methylobacterium extorquens populations," PLOS Genetics, Public Library of Science, vol. 15(11), pages 1-38, November.
  9. Chen, Aimin & Tian, Tianhai & Chen, Yiren & Zhou, Tianshou, 2022. "Stochastic analysis of a complex gene-expression model," Chaos, Solitons & Fractals, Elsevier, vol. 160(C).
  10. Angélique Richard & Loïs Boullu & Ulysse Herbach & Arnaud Bonnafoux & Valérie Morin & Elodie Vallin & Anissa Guillemin & Nan Papili Gao & Rudiyanto Gunawan & Jérémie Cosette & Ophélie Arnaud & Jean-Ja, 2016. "Single-Cell-Based Analysis Highlights a Surge in Cell-to-Cell Molecular Variability Preceding Irreversible Commitment in a Differentiation Process," PLOS Biology, Public Library of Science, vol. 14(12), pages 1-35, December.
  11. Kazunari Iwamoto & Yuki Shindo & Koichi Takahashi, 2016. "Modeling Cellular Noise Underlying Heterogeneous Cell Responses in the Epidermal Growth Factor Signaling Pathway," PLOS Computational Biology, Public Library of Science, vol. 12(11), pages 1-18, November.
  12. Laura Corrales-Guerrero & Asaf Tal & Rinat Arbel-Goren & Vicente Mariscal & Enrique Flores & Antonia Herrero & Joel Stavans, 2015. "Spatial Fluctuations in Expression of the Heterocyst Differentiation Regulatory Gene hetR in Anabaena Filaments," PLOS Genetics, Public Library of Science, vol. 11(4), pages 1-21, April.
  13. Leighton T Izu & Tamás Bányász & Ye Chen-Izu, 2015. "Optimizing Population Variability to Maximize Benefit," PLOS ONE, Public Library of Science, vol. 10(12), pages 1-17, December.
  14. Singh, Abhyudai & Vahdat, Zahra & Xu, Zikai, 2019. "Time-triggered stochastic hybrid systems with two timer-dependent resets," OSF Preprints u8fzg, Center for Open Science.
  15. Niraj Kumar & Abhyudai Singh & Rahul V Kulkarni, 2015. "Transcriptional Bursting in Gene Expression: Analytical Results for General Stochastic Models," PLOS Computational Biology, Public Library of Science, vol. 11(10), pages 1-22, October.
  16. Atefeh Kazeroonian & Fabian Fröhlich & Andreas Raue & Fabian J Theis & Jan Hasenauer, 2016. "CERENA: ChEmical REaction Network Analyzer—A Toolbox for the Simulation and Analysis of Stochastic Chemical Kinetics," PLOS ONE, Public Library of Science, vol. 11(1), pages 1-15, January.
  17. Sarah Anhala Cepeda-Humerez & Jakob Ruess & Gašper Tkačik, 2019. "Estimating information in time-varying signals," PLOS Computational Biology, Public Library of Science, vol. 15(9), pages 1-33, September.
  18. Máté, Gabriell & Néda, Zoltán, 2016. "The advantage of inhomogeneity — Lessons from a noise driven linearized dynamical system," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 445(C), pages 310-317.
  19. Ming Ni & Antoine L Decrulle & Fanette Fontaine & Alice Demarez & Francois Taddei & Ariel B Lindner, 2012. "Pre-Disposition and Epigenetics Govern Variation in Bacterial Survival upon Stress," PLOS Genetics, Public Library of Science, vol. 8(12), pages 1-11, December.
  20. Joby John & Jonathan B Dingwell & Joseph P Cusumano, 2016. "Error Correction and the Structure of Inter-Trial Fluctuations in a Redundant Movement Task," PLOS Computational Biology, Public Library of Science, vol. 12(9), pages 1-30, September.
  21. Lee, Julian, 2023. "Poisson distributions in stochastic dynamics of gene expression: What events do they count?," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 630(C).
  22. Martiny, Emil S. & Jensen, Mogens H. & Heltberg, Mathias S., 2022. "Detecting limit cycles in stochastic time series," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 605(C).
  23. Hao Ge & Pingping Wu & Hong Qian & Xiaoliang Sunney Xie, 2018. "Relatively slow stochastic gene-state switching in the presence of positive feedback significantly broadens the region of bimodality through stabilizing the uninduced phenotypic state," PLOS Computational Biology, Public Library of Science, vol. 14(3), pages 1-24, March.
  24. Jan Hasenauer & Christine Hasenauer & Tim Hucho & Fabian J Theis, 2014. "ODE Constrained Mixture Modelling: A Method for Unraveling Subpopulation Structures and Dynamics," PLOS Computational Biology, Public Library of Science, vol. 10(7), pages 1-17, July.
  25. Marc Weber & Javier Buceta, 2013. "Stochastic Stabilization of Phenotypic States: The Genetic Bistable Switch as a Case Study," PLOS ONE, Public Library of Science, vol. 8(9), pages 1-8, September.
  26. Christine Andres & Jan Hasenauer & Frank Allgower & Tim Hucho, 2012. "Threshold-Free Population Analysis Identifies Larger DRG Neurons to Respond Stronger to NGF Stimulation," PLOS ONE, Public Library of Science, vol. 7(3), pages 1-14, March.
  27. Davin Lunz & Gregory Batt & Jakob Ruess & J Frédéric Bonnans, 2021. "Beyond the chemical master equation: Stochastic chemical kinetics coupled with auxiliary processes," PLOS Computational Biology, Public Library of Science, vol. 17(7), pages 1-24, July.
  28. Kajántó, Sándor & Néda, Zoltán, 2018. "Universality in the coarse-grained fluctuations for a class of linear dynamical systems," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 503(C), pages 215-220.
  29. Manikandan Narayanan & Andrew J Martins & John S Tsang, 2016. "Robust Inference of Cell-to-Cell Expression Variations from Single- and K-Cell Profiling," PLOS Computational Biology, Public Library of Science, vol. 12(7), pages 1-33, July.
  30. Shuangyu Bi & Manika Kargeti & Remy Colin & Niklas Farke & Hannes Link & Victor Sourjik, 2023. "Dynamic fluctuations in a bacterial metabolic network," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
  31. Ziya Kalay & Takahiro K Fujiwara & Akihiro Kusumi, 2012. "Confining Domains Lead to Reaction Bursts: Reaction Kinetics in the Plasma Membrane," PLOS ONE, Public Library of Science, vol. 7(3), pages 1-8, March.
  32. Xiaoling Zhai & Joseph W Larkin & Kaito Kikuchi & Samuel E Redford & Ushasi Roy & Gürol M Süel & Andrew Mugler, 2019. "Statistics of correlated percolation in a bacterial community," PLOS Computational Biology, Public Library of Science, vol. 15(12), pages 1-19, December.
  33. Song, Yi & Xu, Wei, 2021. "Asymmetric Lévy noise changed stability in a gene transcriptional regulatory system," Chaos, Solitons & Fractals, Elsevier, vol. 151(C).
  34. Georg Fritz & Judith A Megerle & Sonja A Westermayer & Delia Brick & Ralf Heermann & Kirsten Jung & Joachim O Rädler & Ulrich Gerland, 2014. "Single Cell Kinetics of Phenotypic Switching in the Arabinose Utilization System of E. coli," PLOS ONE, Public Library of Science, vol. 9(2), pages 1-12, February.
IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.