IDEAS home Printed from https://ideas.repec.org/a/spr/lifeda/v27y2021i1d10.1007_s10985-020-09508-y.html
   My bibliography  Save this article

Accelerated failure time model for data from outcome-dependent sampling

Author

Listed:
  • Jichang Yu

    (Zhongnan University of Economics and Law)

  • Haibo Zhou

    (University of North Carolina at Chapel Hill)

  • Jianwen Cai

    (University of North Carolina at Chapel Hill)

Abstract

Outcome-dependent sampling designs such as the case–control or case–cohort design are widely used in epidemiological studies for their outstanding cost-effectiveness. In this article, we propose and develop a smoothed weighted Gehan estimating equation approach for inference in an accelerated failure time model under a general failure time outcome-dependent sampling scheme. The proposed estimating equation is continuously differentiable and can be solved by the standard numerical methods. In addition to developing asymptotic properties of the proposed estimator, we also propose and investigate a new optimal power-based subsamples allocation criteria in the proposed design by maximizing the power function of a significant test. Simulation results show that the proposed estimator is more efficient than other existing competing estimators and the optimal power-based subsamples allocation will provide an ODS design that yield improved power for the test of exposure effect. We illustrate the proposed method with a data set from the Norwegian Mother and Child Cohort Study to evaluate the relationship between exposure to perfluoroalkyl substances and women’s subfecundity.

Suggested Citation

  • Jichang Yu & Haibo Zhou & Jianwen Cai, 2021. "Accelerated failure time model for data from outcome-dependent sampling," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 27(1), pages 15-37, January.
  • Handle: RePEc:spr:lifeda:v:27:y:2021:i:1:d:10.1007_s10985-020-09508-y
    DOI: 10.1007/s10985-020-09508-y
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s10985-020-09508-y
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s10985-020-09508-y?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Zhezhen Jin, 2003. "Rank-based inference for the accelerated failure time model," Biometrika, Biometrika Trust, vol. 90(2), pages 341-353, June.
    2. Lynn M. Johnson & Robert L. Strawderman, 2009. "Induced smoothing for the semiparametric accelerated failure time model: asymptotics and extensions to clustered data," Biometrika, Biometrika Trust, vol. 96(3), pages 577-590.
    3. Jonathan S. Schildcrout & Shawn P. Garbett & Patrick J. Heagerty, 2013. "Outcome Vector Dependent Sampling with Longitudinal Continuous Response Data: Stratified Sampling Based on Summary Statistics," Biometrics, The International Biometric Society, vol. 69(2), pages 405-416, June.
    4. Haibo Zhou & Wangli Xu & Donglin Zeng & Jianwen Cai, 2014. "Semiparametric inference for data with a continuous outcome from a two-phase probability-dependent sampling scheme," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 76(1), pages 197-215, January.
    5. Rui Song & Haibo Zhou & Michael R. Kosorok, 2009. "A note on semiparametric efficient inference for two-stage outcome-dependent sampling with a continuous outcome," Biometrika, Biometrika Trust, vol. 96(1), pages 221-228.
    6. Weaver, Mark A. & Zhou, Haibo, 2005. "An Estimated Likelihood Method for Continuous Outcome Regression Models With Outcome-Dependent Sampling," Journal of the American Statistical Association, American Statistical Association, vol. 100, pages 459-469, June.
    7. Bin Nan & Menggang Yu & John D. Kalbfleisch, 2006. "Censored linear regression for case-cohort studies," Biometrika, Biometrika Trust, vol. 93(4), pages 747-762, December.
    8. Kani Chen, 2001. "Generalized case–cohort sampling," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 63(4), pages 791-809.
    9. S. Kim & J. Cai & W. Lu, 2013. "More efficient estimators for case-cohort studies," Biometrika, Biometrika Trust, vol. 100(3), pages 695-708.
    10. Zeng, Donglin & Lin, D.Y., 2007. "Efficient Estimation for the Accelerated Failure Time Model," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 1387-1396, December.
    11. Xiaofei Wang & Haibo Zhou, 2010. "Design and Inference for Cancer Biomarker Study with an Outcome and Auxiliary-Dependent Subsampling," Biometrics, The International Biometric Society, vol. 66(2), pages 502-511, June.
    12. Lan Kong & Jianwen Cai, 2009. "Case–Cohort Analysis with Accelerated Failure Time Model," Biometrics, The International Biometric Society, vol. 65(1), pages 135-142, March.
    13. Jianwen Cai & Donglin Zeng, 2007. "Power Calculation for Case–Cohort Studies with Nonrare Events," Biometrics, The International Biometric Society, vol. 63(4), pages 1288-1295, December.
    14. Haibo Zhou & M. A. Weaver & J. Qin & M. P. Longnecker & M. C. Wang, 2002. "A Semiparametric Empirical Likelihood Method for Data from an Outcome-Dependent Sampling Scheme with a Continuous Outcome," Biometrics, The International Biometric Society, vol. 58(2), pages 413-421, June.
    15. Norman E. Breslow & Richard Holubkov, 1997. "Maximum Likelihood Estimation of Logistic Regression Parameters under Two‐phase, Outcome‐dependent Sampling," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 59(2), pages 447-461.
    16. S. Kang & J. Cai, 2009. "Marginal hazards model for case-cohort studies with multiple disease outcomes," Biometrika, Biometrika Trust, vol. 96(4), pages 887-901.
    17. Haibo Zhou & Guoyou Qin & Matthew P. Longnecker, 2011. "A Partial Linear Model in the Outcome-Dependent Sampling Setting to Evaluate the Effect of Prenatal PCB Exposure on Cognitive Function in Children," Biometrics, The International Biometric Society, vol. 67(3), pages 876-885, September.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Jieli Ding & Tsui-Shan Lu & Jianwen Cai & Haibo Zhou, 2017. "Recent progresses in outcome-dependent sampling with failure time data," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 23(1), pages 57-82, January.
    2. Qingning Zhou & Jianwen Cai & Haibo Zhou, 2018. "Outcome†dependent sampling with interval†censored failure time data," Biometrics, The International Biometric Society, vol. 74(1), pages 58-67, March.
    3. Jon Arni Steingrimsson & Robert L. Strawderman, 2017. "Estimation in the Semiparametric Accelerated Failure Time Model With Missing Covariates: Improving Efficiency Through Augmentation," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(519), pages 1221-1235, July.
    4. Mingzhe Wu & Ming Zheng & Wen Yu & Ruofan Wu, 2018. "Estimation and variable selection for semiparametric transformation models under a more efficient cohort sampling design," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 27(3), pages 570-596, September.
    5. Qingning Zhou & Jianwen Cai & Haibo Zhou, 2020. "Semiparametric inference for a two-stage outcome-dependent sampling design with interval-censored failure time data," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 26(1), pages 85-108, January.
    6. Soyoung Kim & Donglin Zeng & Jianwen Cai, 2018. "Analysis of multiple survival events in generalized case‐cohort designs," Biometrics, The International Biometric Society, vol. 74(4), pages 1250-1260, December.
    7. Erik T. Parner & Per K. Andersen & Morten Overgaard, 2020. "Cumulative risk regression in case–cohort studies using pseudo-observations," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 26(4), pages 639-658, October.
    8. Yichen Lou & Peijie Wang & Jianguo Sun, 2023. "A semi-parametric weighted likelihood approach for regression analysis of bivariate interval-censored outcomes from case-cohort studies," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 29(3), pages 628-653, July.
    9. Yanqing Sun & Xiyuan Qian & Qiong Shou & Peter B. Gilbert, 2017. "Analysis of two-phase sampling data with semiparametric additive hazards models," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 23(3), pages 377-399, July.
    10. Haibo Zhou & Rui Song & Yuanshan Wu & Jing Qin, 2011. "Statistical Inference for a Two-Stage Outcome-Dependent Sampling Design with a Continuous Outcome," Biometrics, The International Biometric Society, vol. 67(1), pages 194-202, March.
    11. Yayun Xu & Soyoung Kim & Mei-Jie Zhang & David Couper & Kwang Woo Ahn, 2022. "Competing risks regression models with covariates-adjusted censoring weight under the generalized case-cohort design," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 28(2), pages 241-262, April.
    12. Jing Zhang & Haibo Zhou & Yanyan Liu & Jianwen Cai, 2021. "Conditional screening for ultrahigh-dimensional survival data in case-cohort studies," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 27(4), pages 632-661, October.
    13. Yinghao Pan & Jianwen Cai & Sangmi Kim & Haibo Zhou, 2018. "Regression analysis for secondary response variable in a case‐cohort study," Biometrics, The International Biometric Society, vol. 74(3), pages 1014-1022, September.
    14. Ying Yan & Haibo Zhou & Jianwen Cai, 2017. "Improving efficiency of parameter estimation in case-cohort studies with multivariate failure time data," Biometrics, The International Biometric Society, vol. 73(3), pages 1042-1052, September.
    15. Suhyun Kang & Wenbin Lu & Mengling Liu, 2017. "Efficient estimation for accelerated failure time model under case-cohort and nested case-control sampling," Biometrics, The International Biometric Society, vol. 73(1), pages 114-123, March.
    16. Chiara Di Gravio & Ran Tao & Jonathan S. Schildcrout, 2023. "Design and analysis of two‐phase studies with multivariate longitudinal data," Biometrics, The International Biometric Society, vol. 79(2), pages 1420-1432, June.
    17. Xiaofei Wang & Haibo Zhou, 2010. "Design and Inference for Cancer Biomarker Study with an Outcome and Auxiliary-Dependent Subsampling," Biometrics, The International Biometric Society, vol. 66(2), pages 502-511, June.
    18. Yize Zhao & Matthias Chung & Brent A. Johnson & Carlos S. Moreno & Qi Long, 2016. "Hierarchical Feature Selection Incorporating Known and Novel Biological Information: Identifying Genomic Features Related to Prostate Cancer Recurrence," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 111(516), pages 1427-1439, October.
    19. Xu, Linzhi & Zhang, Jiajia, 2010. "An EM-like algorithm for the semiparametric accelerated failure time gamma frailty model," Computational Statistics & Data Analysis, Elsevier, vol. 54(6), pages 1467-1474, June.
    20. Zhiping Qiu & Jing Qin & Yong Zhou, 2016. "Composite Estimating Equation Method for the Accelerated Failure Time Model with Length-biased Sampling Data," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 43(2), pages 396-415, June.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:lifeda:v:27:y:2021:i:1:d:10.1007_s10985-020-09508-y. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.