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Power Analysis for Population-Based Longitudinal Studies Investigating Gene-Environment Interactions in Chronic Diseases: A Simulation Study

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  • Jinhui Ma
  • Lehana Thabane
  • Joseph Beyene
  • Parminder Raina

Abstract

Conventional methods for sample size calculation for population-based longitudinal studies tend to overestimate the statistical power by overlooking important determinants of the required sample size, such as the measurement errors and unmeasured etiological determinants, etc. In contrast, a simulation-based sample size calculation, if designed properly, allows these determinants to be taken into account and offers flexibility in accommodating complex study design features. The Canadian Longitudinal Study on Aging (CLSA) is a Canada-wide, 20-year follow-up study of 30,000 people between the ages of 45 and 85 years, with in-depth information collected every 3 years. A simulation study, based on an illness-death model, was conducted to: (1) investigate the statistical power profile of the CLSA to detect the effect of environmental and genetic risk factors, and their interaction on age-related chronic diseases; and (2) explore the design alternatives and implementation strategies for increasing the statistical power of population-based longitudinal studies in general. The results showed that the statistical power to identify the effect of environmental and genetic risk exposures, and their interaction on a disease was boosted when: (1) the prevalence of the risk exposures increased; (2) the disease of interest is relatively common in the population; and (3) risk exposures were measured accurately. In addition, the frequency of data collection every three years in the CLSA led to a slightly lower statistical power compared to the design assuming that participants underwent health monitoring continuously. The CLSA had sufficient power to detect a small (1

Suggested Citation

  • Jinhui Ma & Lehana Thabane & Joseph Beyene & Parminder Raina, 2016. "Power Analysis for Population-Based Longitudinal Studies Investigating Gene-Environment Interactions in Chronic Diseases: A Simulation Study," PLOS ONE, Public Library of Science, vol. 11(2), pages 1-20, February.
  • Handle: RePEc:plo:pone00:0149940
    DOI: 10.1371/journal.pone.0149940
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    References listed on IDEAS

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    2. Gregory S Barsh & Gregory P Copenhaver & Greg Gibson & Scott M Williams, 2012. "Guidelines for Genome-Wide Association Studies," PLOS Genetics, Public Library of Science, vol. 8(7), pages 1-2, July.
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