IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v16y2025i1d10.1038_s41467-025-63287-4.html
   My bibliography  Save this article

Segregation of endoderm and mesoderm germ layer identities in the diploblast Nematostella vectensis

Author

Listed:
  • Emmanuel Haillot

    (University of Vienna)

  • Tatiana Lebedeva

    (University of Vienna)

  • Julia Steger

    (University of Vienna)

  • Grigory Genikhovich

    (University of Vienna)

  • Juan D. Montenegro

    (University of Vienna)

  • Alison G. Cole

    (University of Vienna)

  • Ulrich Technau

    (University of Vienna
    University of Vienna)

Abstract

A recent study suggested that morphologically diploblastic sea anemones (Cnidaria) have three segregated germ layer identities corresponding to the bilaterian germ layers. Here, we investigated how these germ layer identities are specified during early development of the sea anemone Nematostella vectensis. Our gene expression analysis shows that the mesodermal territory is specified at the animal pole at 6 h postfertilization, followed by the specification of the definitive endoderm between mesoderm and ectoderm. We then assessed the role of β-catenin, MAPK, and Notch signaling during mesoderm and endoderm formation. We show that the mesodermal marker genes are activated by MAPK signaling while being repressed elsewhere by β-catenin signaling. Delta-expressing mesoderm then signals to Notch-expressing ectoderm, inducing the definitive endoderm domain at the mesoderm/ectoderm interface. Gain- and loss-of-function experiments showed that Notch signaling is sufficient for endoderm induction. Based on our results, we propose a model of germ layer specification in Nematostella defined by a crosstalk of MAPK, β-catenin, and Notch signaling. Given the similarity of the germ layer specification between the sea anemone and echinoderms, we propose that triploblasty may have predated the split of cnidarians and bilaterians.

Suggested Citation

  • Emmanuel Haillot & Tatiana Lebedeva & Julia Steger & Grigory Genikhovich & Juan D. Montenegro & Alison G. Cole & Ulrich Technau, 2025. "Segregation of endoderm and mesoderm germ layer identities in the diploblast Nematostella vectensis," Nature Communications, Nature, vol. 16(1), pages 1-16, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-63287-4
    DOI: 10.1038/s41467-025-63287-4
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-025-63287-4
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-025-63287-4?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Aline Chessel & Noémie Crozé & Maria Dolores Molina & Laura Taberner & Philippe Dru & Luc Martin & Thierry Lepage, 2023. "RAS-independent ERK activation by constitutively active KSR3 in non-chordate metazoa," Nature Communications, Nature, vol. 14(1), pages 1-26, December.
    2. Tatiana Lebedeva & Andrew J. Aman & Thomas Graf & Isabell Niedermoser & Bob Zimmermann & Yulia Kraus & Magdalena Schatka & Adrien Demilly & Ulrich Technau & Grigory Genikhovich, 2021. "Cnidarian-bilaterian comparison reveals the ancestral regulatory logic of the β-catenin dependent axial patterning," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
    3. Isabelle S. Peter & Eric H. Davidson, 2011. "A gene regulatory network controlling the embryonic specification of endoderm," Nature, Nature, vol. 474(7353), pages 635-639, June.
    4. Yulia Kraus & Andy Aman & Ulrich Technau & Grigory Genikhovich, 2016. "Pre-bilaterian origin of the blastoporal axial organizer," Nature Communications, Nature, vol. 7(1), pages 1-9, September.
    5. Bob Zimmermann & Juan D. Montenegro & Sofia M. C. Robb & Whitney J. Fropf & Lukas Weilguny & Shuonan He & Shiyuan Chen & Jessica Lovegrove-Walsh & Eric M. Hill & Cheng-Yi Chen & Katerina Ragkousi & Da, 2023. "Topological structures and syntenic conservation in sea anemone genomes," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    6. Cordelia Rauskolb & Trudy Correia & Kenneth D. Irvine, 1999. "Fringe-dependent separation of dorsal and ventral cells in the Drosophila wing," Nature, Nature, vol. 401(6752), pages 476-480, September.
    7. Athula H. Wikramanayake & Melanie Hong & Patricia N. Lee & Kevin Pang & Christine A. Byrum & Joanna M. Bince & Ronghui Xu & Mark Q. Martindale, 2003. "An ancient role for nuclear β-catenin in the evolution of axial polarity and germ layer segregation," Nature, Nature, vol. 426(6965), pages 446-450, November.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Tatiana Lebedeva & Johan Boström & Stanislav Kremnyov & David Mörsdorf & Isabell Niedermoser & Evgeny Genikhovich & Andreas Hejnol & Igor Adameyko & Grigory Genikhovich, 2025. "β-catenin-driven endomesoderm specification is a Bilateria-specific novelty," Nature Communications, Nature, vol. 16(1), pages 1-10, December.
    2. Mario Ivanković & Jeremias N. Brand & Luca Pandolfini & Thomas Brown & Martin Pippel & Andrei Rozanski & Til Schubert & Markus A. Grohme & Sylke Winkler & Laura Robledillo & Meng Zhang & Azzurra Codin, 2024. "A comparative analysis of planarian genomes reveals regulatory conservation in the face of rapid structural divergence," Nature Communications, Nature, vol. 15(1), pages 1-21, December.
    3. Jonathan E. Valencia & Isabelle S. Peter, 2024. "Combinatorial regulatory states define cell fate diversity during embryogenesis," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
    4. Cummings, F.W, 2004. "A model of morphogenesis," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 339(3), pages 531-547.
    5. Shakson Isaac & Douglas Dubosky & Ashley Waldron & Natsuko Emura & Aidan Furze & Kavya Rao & Masaru Mori & Ashok Ragavendran & Hideki Makinoshima & Mamiko Yajima, 2025. "Unique metabolic regulation of micromeres contributes to gastrulation in the sea urchin embryo," Nature Communications, Nature, vol. 16(1), pages 1-18, December.
    6. Alison G. Cole & Stefan M. Jahnel & Sabrina Kaul & Julia Steger & Julia Hagauer & Andreas Denner & Patricio Ferrer Murguia & Elisabeth Taudes & Bob Zimmermann & Robert Reischl & Patrick R. H. Steinmet, 2023. "Muscle cell-type diversification is driven by bHLH transcription factor expansion and extensive effector gene duplications," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
    7. Paula Miramón-Puértolas & Eudald Pascual-Carreras & Patrick R. H. Steinmetz, 2024. "A population of Vasa2 and Piwi1 expressing cells generates germ cells and neurons in a sea anemone," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    8. Julia Baranyk & Kristen Malir & Miguel A. P. Silva & Sakura Rieck & Gracie Scheve & Nagayasu Nakanishi, 2025. "Structural, molecular and developmental evidence for cell-type diversity in cnidarian mechanosensory neurons," Nature Communications, Nature, vol. 16(1), pages 1-12, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-63287-4. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.