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An archetype and scaling of developmental tissue dynamics across species

Author

Listed:
  • Yoshihiro Morishita

    (RIKEN Center for Biosystems Dynamics Research
    Japan Science and Technology Agency)

  • Sang-Woo Lee

    (RIKEN Center for Biosystems Dynamics Research)

  • Takayuki Suzuki

    (Osaka Metropolitan University)

  • Hitoshi Yokoyama

    (Hirosaki University)

  • Yasuhiro Kamei

    (National Institute for Basic Biology, Myodaiji)

  • Koji Tamura

    (Tohoku University)

  • Aiko Kawasumi-Kita

    (RIKEN Center for Biosystems Dynamics Research)

Abstract

Morphometric studies have revealed the existence of simple geometric relationships among various animal shapes. However, we have little knowledge of the mathematical principles behind the morphogenetic dynamics that form the organ/body shapes of different species. Here, we address this issue by focusing on limb morphogenesis in Gallus gallus domesticus (chicken) and Xenopus laevis (African clawed frog). To compare the deformation dynamics between tissues with different sizes/shapes as well as their developmental rates, we introduce a species-specific rescaled spatial coordinate and a common clock necessary for cross-species synchronization of developmental times. We find that tissue dynamics are well conserved across species under this spacetime coordinate system, at least from the early stages of development through the phase when basic digit patterning is established. For this developmental period, we also reveal that the tissue dynamics of both species are mapped with each other through a time-variant linear transformation in real physical space, from which hypotheses on a species-independent archetype of tissue dynamics and morphogenetic scaling are proposed.

Suggested Citation

  • Yoshihiro Morishita & Sang-Woo Lee & Takayuki Suzuki & Hitoshi Yokoyama & Yasuhiro Kamei & Koji Tamura & Aiko Kawasumi-Kita, 2023. "An archetype and scaling of developmental tissue dynamics across species," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-43902-y
    DOI: 10.1038/s41467-023-43902-y
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    References listed on IDEAS

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    1. Joerg A. Fritz & Joseph Brancale & Masayoshi Tokita & Kevin J. Burns & M. Brent Hawkins & Arhat Abzhanov & Michael P. Brenner, 2014. "Shared developmental programme strongly constrains beak shape diversity in songbirds," Nature Communications, Nature, vol. 5(1), pages 1-9, September.
    2. Bernd Boehm & Henrik Westerberg & Gaja Lesnicar-Pucko & Sahdia Raja & Michael Rautschka & James Cotterell & Jim Swoger & James Sharpe, 2010. "The Role of Spatially Controlled Cell Proliferation in Limb Bud Morphogenesis," PLOS Biology, Public Library of Science, vol. 8(7), pages 1-21, July.
    3. Anjali Rao & Dalia Barkley & Gustavo S. França & Itai Yanai, 2021. "Exploring tissue architecture using spatial transcriptomics," Nature, Nature, vol. 596(7871), pages 211-220, August.
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