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The AMPK-Sirtuin 1-YAP axis is regulated by fluid flow intensity and controls autophagy flux in kidney epithelial cells

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  • Aurore Claude-Taupin

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Pierre Isnard

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Alessia Bagattin

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Nicolas Kuperwasser

    (Structure Fédérative de Recherche Necker)

  • Federica Roccio

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Biagina Ruscica

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Nicolas Goudin

    (Structure Fédérative de Recherche Necker)

  • Meriem Garfa-Traoré

    (Structure Fédérative de Recherche Necker)

  • Alice Regnier

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Lisa Turinsky

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Martine Burtin

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Marc Foretz

    (Inserm U1016 - CNRS UMR8104 – Université Paris Cité)

  • Marco Pontoglio

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Etienne Morel

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Benoit Viollet

    (Inserm U1016 - CNRS UMR8104 – Université Paris Cité)

  • Fabiola Terzi

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Patrice Codogno

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

  • Nicolas Dupont

    (Université Paris Cité, INSERM UMR-S1151, CNRS UMR-S8253, Institut Necker Enfants Malades)

Abstract

Shear stress generated by urinary fluid flow is an important regulator of renal function. Its dysregulation is observed in various chronic and acute kidney diseases. Previously, we demonstrated that primary cilium-dependent autophagy allows kidney epithelial cells to adapt their metabolism in response to fluid flow. Here, we show that nuclear YAP/TAZ negatively regulates autophagy flux in kidney epithelial cells subjected to fluid flow. This crosstalk is supported by a primary cilium-dependent activation of AMPK and SIRT1, independently of the Hippo pathway. We confirm the relevance of the YAP/TAZ-autophagy molecular dialog in vivo using a zebrafish model of kidney development and a unilateral ureteral obstruction mouse model. In addition, an in vitro assay simulating pathological accelerated flow observed at early stages of chronic kidney disease (CKD) activates YAP, leading to a primary cilium-dependent inhibition of autophagic flux. We confirm this YAP/autophagy relationship in renal biopsies from patients suffering from diabetic kidney disease (DKD), the leading cause of CKD. Our findings demonstrate the importance of YAP/TAZ and autophagy in the translation of fluid flow into cellular and physiological responses. Dysregulation of this pathway is associated with the early onset of CKD.

Suggested Citation

  • Aurore Claude-Taupin & Pierre Isnard & Alessia Bagattin & Nicolas Kuperwasser & Federica Roccio & Biagina Ruscica & Nicolas Goudin & Meriem Garfa-Traoré & Alice Regnier & Lisa Turinsky & Martine Burti, 2023. "The AMPK-Sirtuin 1-YAP axis is regulated by fluid flow intensity and controls autophagy flux in kidney epithelial cells," Nature Communications, Nature, vol. 14(1), pages 1-20, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-43775-1
    DOI: 10.1038/s41467-023-43775-1
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    1. Carles Cantó & Zachary Gerhart-Hines & Jerome N. Feige & Marie Lagouge & Lilia Noriega & Jill C. Milne & Peter J. Elliott & Pere Puigserver & Johan Auwerx, 2009. "AMPK regulates energy expenditure by modulating NAD+ metabolism and SIRT1 activity," Nature, Nature, vol. 458(7241), pages 1056-1060, April.
    2. Mariana Pavel & Maurizio Renna & So Jung Park & Fiona M. Menzies & Thomas Ricketts & Jens Füllgrabe & Avraham Ashkenazi & Rebecca A. Frake & Alejandro Carnicer Lombarte & Carla F. Bento & Kristian Fra, 2018. "Contact inhibition controls cell survival and proliferation via YAP/TAZ-autophagy axis," Nature Communications, Nature, vol. 9(1), pages 1-18, December.
    3. Li Wang & Jiang-Yun Luo & Bochuan Li & Xiao Yu Tian & Li-Jing Chen & Yuhong Huang & Jian Liu & Dan Deng & Chi Wai Lau & Song Wan & Ding Ai & King-Lun Kingston Mak & Ka Kui Tong & Kin Ming Kwan & Nanpi, 2016. "Integrin-YAP/TAZ-JNK cascade mediates atheroprotective effect of unidirectional shear flow," Nature, Nature, vol. 540(7634), pages 579-582, December.
    4. Youngmin A. Lee & Luke A. Noon & Kemal M. Akat & Maria D. Ybanez & Ting-Fang Lee & Marie-Luise Berres & Naoto Fujiwara & Nicolas Goossens & Hsin-I Chou & Fatemeh P. Parvin-Nejad & Bilon Khambu & Elisa, 2018. "Autophagy is a gatekeeper of hepatic differentiation and carcinogenesis by controlling the degradation of Yap," Nature Communications, Nature, vol. 9(1), pages 1-12, December.
    5. Zaiming Tang & Mary Grace Lin & Timothy Richard Stowe & She Chen & Muyuan Zhu & Tim Stearns & Brunella Franco & Qing Zhong, 2013. "Autophagy promotes primary ciliogenesis by removing OFD1 from centriolar satellites," Nature, Nature, vol. 502(7470), pages 254-257, October.
    6. Olatz Pampliega & Idil Orhon & Bindi Patel & Sunandini Sridhar & Antonio Díaz-Carretero & Isabelle Beau & Patrice Codogno & Birgit H. Satir & Peter Satir & Ana Maria Cuervo, 2013. "Functional interaction between autophagy and ciliogenesis," Nature, Nature, vol. 502(7470), pages 194-200, October.
    7. Álvaro F. Fernández & Salwa Sebti & Yongjie Wei & Zhongju Zou & Mingjun Shi & Kathryn L. McMillan & Congcong He & Tabitha Ting & Yang Liu & Wei-Chung Chiang & Denise K. Marciano & Gabriele G. Schiatta, 2018. "Disruption of the beclin 1–BCL2 autophagy regulatory complex promotes longevity in mice," Nature, Nature, vol. 558(7708), pages 136-140, June.
    8. Yao Yuan & Jeannie Park & Amber Feng & Parirokh Awasthi & Zhiyong Wang & Qianming Chen & Ramiro Iglesias-Bartolome, 2020. "YAP1/TAZ-TEAD transcriptional networks maintain skin homeostasis by regulating cell proliferation and limiting KLF4 activity," Nature Communications, Nature, vol. 11(1), pages 1-14, December.
    9. Sirio Dupont & Leonardo Morsut & Mariaceleste Aragona & Elena Enzo & Stefano Giulitti & Michelangelo Cordenonsi & Francesca Zanconato & Jimmy Le Digabel & Mattia Forcato & Silvio Bicciato & Nicola Elv, 2011. "Role of YAP/TAZ in mechanotransduction," Nature, Nature, vol. 474(7350), pages 179-183, June.
    10. Hyun Jung Lee & Miguel F. Diaz & Katherine M. Price & Joyce A. Ozuna & Songlin Zhang & Eva M. Sevick-Muraca & John P. Hagan & Pamela L. Wenzel, 2017. "Fluid shear stress activates YAP1 to promote cancer cell motility," Nature Communications, Nature, vol. 8(1), pages 1-14, April.
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