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Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis

Author

Listed:
  • Yichen Yu

    (Duke University)

  • Robert T. O’Neill

    (University of Liverpool)

  • Roman Boulatov

    (University of Liverpool)

  • Ross A. Widenhoefer

    (Duke University)

  • Stephen L. Craig

    (Duke University)

Abstract

Allosteric control of reaction thermodynamics is well understood, but the mechanisms by which changes in local geometries of receptor sites lower activation reaction barriers in electronically uncoupled, remote reaction moieties remain relatively unexplored. Here we report a molecular scaffold in which the rate of thermal E-to-Z isomerization of an alkene increases by a factor of as much as 104 in response to fast binding of a metal ion to a remote receptor site. A mechanochemical model of the olefin coupled to a compressive harmonic spring reproduces the observed acceleration quantitatively, adding the studied isomerization to the very few reactions demonstrated to be sensitive to extrinsic compressive force. The work validates experimentally the generalization of mechanochemical kinetics to compressive loads and demonstrates that the formalism of force-coupled reactivity offers a productive framework for the quantitative analysis of the molecular basis of allosteric control of reaction kinetics. Important differences in the effects of compressive vs. tensile force on the kinetic stabilities of molecules are discussed.

Suggested Citation

  • Yichen Yu & Robert T. O’Neill & Roman Boulatov & Ross A. Widenhoefer & Stephen L. Craig, 2023. "Allosteric control of olefin isomerization kinetics via remote metal binding and its mechanochemical analysis," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-40842-5
    DOI: 10.1038/s41467-023-40842-5
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    References listed on IDEAS

    as
    1. Yancong Tian & Timothy J. Kucharski & Qing-Zheng Yang & Roman Boulatov, 2013. "Model studies of force-dependent kinetics of multi-barrier reactions," Nature Communications, Nature, vol. 4(1), pages 1-10, November.
    2. Hesam N. Motlagh & James O. Wrabl & Jing Li & Vincent J. Hilser, 2014. "The ensemble nature of allostery," Nature, Nature, vol. 508(7496), pages 331-339, April.
    3. Chenxu Wang & Sergey Akbulatov & Qihan Chen & Yancong Tian & Cai-Li Sun & Marc Couty & Roman Boulatov, 2022. "The molecular mechanism of constructive remodeling of a mechanically-loaded polymer," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
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