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Structural insights into p300 regulation and acetylation-dependent genome organisation

Author

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  • Ziad Ibrahim

    (University of Leicester
    St. Jude Children’s Research Hospital)

  • Tao Wang

    (CNRS UMR 5309, INSERM U1209, Université Grenoble Alpes, Institute for Advanced Biosciences)

  • Olivier Destaing

    (CNRS UMR 5309, INSERM U1209, Université Grenoble Alpes, Institute for Advanced Biosciences)

  • Nicola Salvi

    (Institut de Biologie Structurale, CNRS, CEA, UGA)

  • Naghmeh Hoghoughi

    (CNRS UMR 5309, INSERM U1209, Université Grenoble Alpes, Institute for Advanced Biosciences)

  • Clovis Chabert

    (CNRS UMR 5309, INSERM U1209, Université Grenoble Alpes, Institute for Advanced Biosciences)

  • Alexandra Rusu

    (University of Leicester)

  • Jinjun Gao

    (The University of Chicago)

  • Leonardo Feletto

    (University of Leicester)

  • Nicolas Reynoird

    (CNRS UMR 5309, INSERM U1209, Université Grenoble Alpes, Institute for Advanced Biosciences)

  • Thomas Schalch

    (University of Leicester)

  • Yingming Zhao

    (The University of Chicago)

  • Martin Blackledge

    (Institut de Biologie Structurale, CNRS, CEA, UGA)

  • Saadi Khochbin

    (CNRS UMR 5309, INSERM U1209, Université Grenoble Alpes, Institute for Advanced Biosciences)

  • Daniel Panne

    (University of Leicester)

Abstract

Histone modifications are deposited by chromatin modifying enzymes and read out by proteins that recognize the modified state. BRD4-NUT is an oncogenic fusion protein of the acetyl lysine reader BRD4 that binds to the acetylase p300 and enables formation of long-range intra- and interchromosomal interactions. We here examine how acetylation reading and writing enable formation of such interactions. We show that NUT contains an acidic transcriptional activation domain that binds to the TAZ2 domain of p300. We use NMR to investigate the structure of the complex and found that the TAZ2 domain has an autoinhibitory role for p300. NUT-TAZ2 interaction or mutations found in cancer that interfere with autoinhibition by TAZ2 allosterically activate p300. p300 activation results in a self-organizing, acetylation-dependent feed-forward reaction that enables long-range interactions by bromodomain multivalent acetyl-lysine binding. We discuss the implications for chromatin organisation, gene regulation and dysregulation in disease.

Suggested Citation

  • Ziad Ibrahim & Tao Wang & Olivier Destaing & Nicola Salvi & Naghmeh Hoghoughi & Clovis Chabert & Alexandra Rusu & Jinjun Gao & Leonardo Feletto & Nicolas Reynoird & Thomas Schalch & Yingming Zhao & Ma, 2022. "Structural insights into p300 regulation and acetylation-dependent genome organisation," Nature Communications, Nature, vol. 13(1), pages 1-23, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-35375-2
    DOI: 10.1038/s41467-022-35375-2
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    1. Masaki Kikuchi & Satoshi Morita & Masatoshi Wakamori & Shin Sato & Tomomi Uchikubo-Kamo & Takehiro Suzuki & Naoshi Dohmae & Mikako Shirouzu & Takashi Umehara, 2023. "Epigenetic mechanisms to propagate histone acetylation by p300/CBP," Nature Communications, Nature, vol. 14(1), pages 1-16, December.

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