IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v13y2022i1d10.1038_s41467-022-28680-3.html
   My bibliography  Save this article

Natural variation in Glume Coverage 1 causes naked grains in sorghum

Author

Listed:
  • Peng Xie

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Sanyuan Tang

    (Chinese Academy of Sciences)

  • Chengxuan Chen

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Huili Zhang

    (Chinese Academy of Sciences)

  • Feifei Yu

    (Chinese Academy of Sciences)

  • Chao Li

    (Chinese Academy of Sciences)

  • Huimin Wei

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Yi Sui

    (Chinese Academy of Agricultural Sciences)

  • Chuanyin Wu

    (Chinese Academy of Agricultural Sciences)

  • Xianmin Diao

    (Chinese Academy of Agricultural Sciences)

  • Yaorong Wu

    (Chinese Academy of Sciences)

  • Qi Xie

    (Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

Abstract

One of the most critical steps in cereal threshing is the ease with which seeds are detached from sticky glumes. Naked grains with low glume coverage have dramatically increased threshing efficiency and seed quality. Here, we demonstrate that GC1 (Glume Coverage 1), encoding an atypical G protein γ subunit, negatively regulates sorghum glume coverage. Naturally truncated variations of GC1 C-terminus accumulate at higher protein levels and affect the stability of a patatin-related phospholipase SbpPLAII-1. A strong positive selection signature around the GC1 genic region is found in the naked sorghum cultivars. Our findings reveal a crucial event during sorghum domestication through a subtle regulation of glume development by GC1 C-terminus variation, and establish a strategy for future breeding of naked grains.

Suggested Citation

  • Peng Xie & Sanyuan Tang & Chengxuan Chen & Huili Zhang & Feifei Yu & Chao Li & Huimin Wei & Yi Sui & Chuanyin Wu & Xianmin Diao & Yaorong Wu & Qi Xie, 2022. "Natural variation in Glume Coverage 1 causes naked grains in sorghum," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-28680-3
    DOI: 10.1038/s41467-022-28680-3
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-022-28680-3
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-022-28680-3?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Andrew H. Paterson & John E. Bowers & Rémy Bruggmann & Inna Dubchak & Jane Grimwood & Heidrun Gundlach & Georg Haberer & Uffe Hellsten & Therese Mitros & Alexander Poliakov & Jeremy Schmutz & Manuel S, 2009. "The Sorghum bicolor genome and the diversification of grasses," Nature, Nature, vol. 457(7229), pages 551-556, January.
    2. Shengyuan Sun & Lei Wang & Hailiang Mao & Lin Shao & Xianghua Li & Jinghua Xiao & Yidan Ouyang & Qifa Zhang, 2018. "A G-protein pathway determines grain size in rice," Nature Communications, Nature, vol. 9(1), pages 1-11, December.
    3. Huai Wang & Tina Nussbaum-Wagler & Bailin Li & Qiong Zhao & Yves Vigouroux & Marianna Faller & Kirsten Bomblies & Lewis Lukens & John F. Doebley, 2005. "The origin of the naked grains of maize," Nature, Nature, vol. 436(7051), pages 714-719, August.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Katia A. Figueroa-Rodríguez & Francisco Hernández-Rosas & Benjamín Figueroa-Sandoval & Joel Velasco-Velasco & Noé Aguilar Rivera, 2019. "What Has Been the Focus of Sugarcane Research? A Bibliometric Overview," IJERPH, MDPI, vol. 16(18), pages 1-15, September.
    2. Jiguo Cao & Liangliang Wang & Zhongwen Huang & Junyi Gai & Rongling Wu, 2017. "Functional Mapping of Multiple Dynamic Traits," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 22(1), pages 60-75, March.
    3. Veronika DUMALASOVÁ & Leona SVOBODOVÁ & Alena HANZALOVÁ, 2012. "Differentially expressed gene transcripts in wheat and barley leaves upon leaf spot infection," Czech Journal of Genetics and Plant Breeding, Czech Academy of Agricultural Sciences, vol. 48(3), pages 108-119.
    4. Liang Ma & Ke-Wei Liu & Zhen Li & Yu-Yun Hsiao & Yiying Qi & Tao Fu & Guang-Da Tang & Diyang Zhang & Wei-Hong Sun & Ding-Kun Liu & Yuanyuan Li & Gui-Zhen Chen & Xue-Die Liu & Xing-Yu Liao & Yu-Ting Ji, 2023. "Diploid and tetraploid genomes of Acorus and the evolution of monocots," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
    5. Yong-Pei Wu & Yu-Chi Chang & Su-Chen Kuo & Dah-Jing Liao & Ting-Yu Shen & Hsin-I Kuo & Sheng-Wen Wang & Yu-Chien Tseng, 2023. "The Breeding of Waxy Sorghum Using Traditional Three-Line Method and Marker-Assisted Selection," Agriculture, MDPI, vol. 13(11), pages 1-14, October.
    6. Hongzeng Fan & Jibin Wang & Songhao Shen & Mingchong Yang & Suli Li & Bihong Feng & Ruimin Zhong & Chongjian Ma & Jihong Wang & Ruohan Xie & Lingqiang Wang, 2022. "High-Throughput Phenotyping of Cross-Sectional Morphology to Assess Stalk Mechanical Properties in Sorghum," Agriculture, MDPI, vol. 12(10), pages 1-13, October.
    7. Md. S. Islam & Per McCord & Quentin D. Read & Lifang Qin & Alexander E. Lipka & Sushma Sood & James Todd & Marcus Olatoye, 2022. "Accuracy of Genomic Prediction of Yield and Sugar Traits in Saccharum spp. Hybrids," Agriculture, MDPI, vol. 12(9), pages 1-22, September.
    8. Katrien M. Devos & Peng Qi & Bochra A. Bahri & Davis M. Gimode & Katharine Jenike & Samuel J. Manthi & Dagnachew Lule & Thomas Lux & Liliam Martinez-Bello & Thomas H. Pendergast & Chris Plott & Dipnar, 2023. "Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet," Nature Communications, Nature, vol. 14(1), pages 1-15, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-28680-3. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.