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A bispecific monomeric nanobody induces spike trimer dimers and neutralizes SARS-CoV-2 in vivo

Author

Listed:
  • Leo Hanke

    (Karolinska Institutet)

  • Hrishikesh Das

    (Karolinska Institutet)

  • Daniel J. Sheward

    (Karolinska Institutet
    University of Cape Town)

  • Laura Perez Vidakovics

    (Karolinska Institutet)

  • Egon Urgard

    (Karolinska Institutet)

  • Ainhoa Moliner-Morro

    (Karolinska Institutet)

  • Changil Kim

    (Karolinska Institutet)

  • Vivien Karl

    (Karolinska Institutet)

  • Alec Pankow

    (Karolinska Institutet)

  • Natalie L. Smith

    (Karolinska Institutet)

  • Bartlomiej Porebski

    (Karolinska Institutet)

  • Oscar Fernandez-Capetillo

    (Karolinska Institutet
    Genomic Instability Group, Spanish National Cancer Research Centre (CNIO))

  • Erdinc Sezgin

    (Karolinska Institutet)

  • Gabriel K. Pedersen

    (Statens Serum Institut)

  • Jonathan M. Coquet

    (Karolinska Institutet)

  • B. Martin Hällberg

    (Karolinska Institutet
    Centre for Structural Systems Biology)

  • Ben Murrell

    (Karolinska Institutet)

  • Gerald M. McInerney

    (Karolinska Institutet)

Abstract

Antibodies binding to the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike have therapeutic promise, but emerging variants show the potential for virus escape. This emphasizes the need for therapeutic molecules with distinct and novel neutralization mechanisms. Here we describe the isolation of a nanobody that interacts simultaneously with two RBDs from different spike trimers of SARS-CoV-2, rapidly inducing the formation of spike trimer–dimers leading to the loss of their ability to attach to the host cell receptor, ACE2. We show that this nanobody potently neutralizes SARS-CoV-2, including the beta and delta variants, and cross-neutralizes SARS-CoV. Furthermore, we demonstrate the therapeutic potential of the nanobody against SARS-CoV-2 and the beta variant in a human ACE2 transgenic mouse model. This naturally elicited bispecific monomeric nanobody establishes an uncommon strategy for potent inactivation of viral antigens and represents a promising antiviral against emerging SARS-CoV-2 variants.

Suggested Citation

  • Leo Hanke & Hrishikesh Das & Daniel J. Sheward & Laura Perez Vidakovics & Egon Urgard & Ainhoa Moliner-Morro & Changil Kim & Vivien Karl & Alec Pankow & Natalie L. Smith & Bartlomiej Porebski & Oscar , 2022. "A bispecific monomeric nanobody induces spike trimer dimers and neutralizes SARS-CoV-2 in vivo," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-021-27610-z
    DOI: 10.1038/s41467-021-27610-z
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    References listed on IDEAS

    as
    1. Sandile Cele & Inbal Gazy & Laurelle Jackson & Shi-Hsia Hwa & Houriiyah Tegally & Gila Lustig & Jennifer Giandhari & Sureshnee Pillay & Eduan Wilkinson & Yeshnee Naidoo & Farina Karim & Yashica Ganga , 2021. "Escape of SARS-CoV-2 501Y.V2 from neutralization by convalescent plasma," Nature, Nature, vol. 593(7857), pages 142-146, May.
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    1. Mingxi Li & Yifei Ren & Zhen Qin Aw & Bo Chen & Ziqing Yang & Yuqing Lei & Lin Cheng & Qingtai Liang & Junxian Hong & Yiling Yang & Jing Chen & Yi Hao Wong & Jing Wei & Sisi Shan & Senyan Zhang & Jiwa, 2022. "Broadly neutralizing and protective nanobodies against SARS-CoV-2 Omicron subvariants BA.1, BA.2, and BA.4/5 and diverse sarbecoviruses," Nature Communications, Nature, vol. 13(1), pages 1-17, December.

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