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Multivariate genomic scan implicates novel loci and haem metabolism in human ageing

Author

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  • Paul R. H. J. Timmers

    (University of Edinburgh)

  • James F. Wilson

    (University of Edinburgh
    University of Edinburgh)

  • Peter K. Joshi

    (University of Edinburgh)

  • Joris Deelen

    (Max Planck Institute for Biology of Ageing
    Leiden University Medical Center)

Abstract

Ageing phenotypes, such as years lived in good health (healthspan), total years lived (lifespan), and survival until an exceptional old age (longevity), are of interest to us all but require exceptionally large sample sizes to study genetically. Here we combine existing genome-wide association summary statistics for healthspan, parental lifespan, and longevity in a multivariate framework, increasing statistical power, and identify 10 genomic loci which influence all three phenotypes, of which five (near FOXO3, SLC4A7, LINC02513, ZW10, and FGD6) have not been reported previously at genome-wide significance. The majority of these 10 loci are associated with cardiovascular disease and some affect the expression of genes known to change their activity with age. In total, we implicate 78 genes, and find these to be enriched for ageing pathways previously highlighted in model organisms, such as the response to DNA damage, apoptosis, and homeostasis. Finally, we identify a pathway worthy of further study: haem metabolism.

Suggested Citation

  • Paul R. H. J. Timmers & James F. Wilson & Peter K. Joshi & Joris Deelen, 2020. "Multivariate genomic scan implicates novel loci and haem metabolism in human ageing," Nature Communications, Nature, vol. 11(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-17312-3
    DOI: 10.1038/s41467-020-17312-3
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    References listed on IDEAS

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    1. Cynthia J. Kenyon, 2010. "The genetics of ageing," Nature, Nature, vol. 464(7288), pages 504-512, March.
    2. Marjolein J. Peters & Roby Joehanes & Luke C. Pilling & Claudia Schurmann & Karen N. Conneely & Joseph Powell & Eva Reinmaa & George L. Sutphin & Alexandra Zhernakova & Katharina Schramm & Yana A. Wil, 2015. "The transcriptional landscape of age in human peripheral blood," Nature Communications, Nature, vol. 6(1), pages 1-14, December.
    3. Kyoko Watanabe & Erdogan Taskesen & Arjen Bochoven & Danielle Posthuma, 2017. "Functional mapping and annotation of genetic associations with FUMA," Nature Communications, Nature, vol. 8(1), pages 1-11, December.
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