IDEAS home Printed from https://ideas.repec.org/a/jss/jstsof/v061i12.html
   My bibliography  Save this article

coneproj: An R Package for the Primal or Dual Cone Projections with Routines for Constrained Regression

Author

Listed:
  • Liao, Xiyue
  • Meyer, Mary C.

Abstract

The coneproj package contains routines for cone projection and quadratic programming, plus applications in estimation and inference for constrained parametric regression and shape-restricted regression problems. A short routine check_irred is included to check the irreducibility of a matrix, whose rows are supposed to be a set of cone edges used by coneA or coneB. For the coneA and coneB functions, the vector to project is provided by the user, along with the cone specification and a weight vector. For coneA, a constraint matrix is specified to define the cone, and for coneB, the cone edges are provided. The coneA and coneB algorithms have been coded and compiled in C++, and are called by R. The qprog function transforms a quadratic programming problem into a cone projection problem and calls coneA. The constreg function does estimation and inference for parametric least-squares regression with constraints on the parameters (using coneA). A p value for the “one-sided” test is provided. The shapereg function uses coneB to provide a least-squares estimator for a regression function with several choices of constraints including isotonic and convex regression functions, as well as estimates of parametrically modeled covariate effects. Results from hypothesis tests for significance of the effects are also provided. This package is now available from the Comprehensive R Archive Network at http://CRAN.R-project.org/package=coneproj.

Suggested Citation

  • Liao, Xiyue & Meyer, Mary C., 2014. "coneproj: An R Package for the Primal or Dual Cone Projections with Routines for Constrained Regression," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 61(i12).
  • Handle: RePEc:jss:jstsof:v:061:i12
    DOI: http://hdl.handle.net/10.18637/jss.v061.i12
    as

    Download full text from publisher

    File URL: https://www.jstatsoft.org/index.php/jss/article/view/v061i12/v61i12.pdf
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v061i12/coneproj_1.5.tar.gz
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v061i12/v61i12.R
    Download Restriction: no

    File URL: https://libkey.io/http://hdl.handle.net/10.18637/jss.v061.i12?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Eddelbuettel, Dirk & Sanderson, Conrad, 2014. "RcppArmadillo: Accelerating R with high-performance C++ linear algebra," Computational Statistics & Data Analysis, Elsevier, vol. 71(C), pages 1054-1063.
    2. de Leeuw, Jan & Hornik, Kurt & Mair, Patrick, 2009. "Isotone Optimization in R: Pool-Adjacent-Violators Algorithm (PAVA) and Active Set Methods," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 32(i05).
    3. Mary C. Meyer, 2003. "A test for linear versus convex regression function using shape-restricted regression," Biometrika, Biometrika Trust, vol. 90(1), pages 223-232, March.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Sanjida Tasnim, 2021. "Use of Shape Restricted Regression Methods for Fitting Model of Per Capita GDP: A Global Economic Scenario of 2018," International Journal of Statistics and Probability, Canadian Center of Science and Education, vol. 10(4), pages 1-52, July.
    2. Liu, Ruixuan & Yu, Zhengfei, 2022. "Sample selection models with monotone control functions," Journal of Econometrics, Elsevier, vol. 226(2), pages 321-342.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Wilson J. Wright & Peter N. Neitlich & Alyssa E. Shiel & Mevin B. Hooten, 2022. "Mechanistic spatial models for heavy metal pollution," Environmetrics, John Wiley & Sons, Ltd., vol. 33(8), December.
    2. Eduardo L. Montoya & Wendy Meiring, 2016. "An F-type test for detecting departure from monotonicity in a functional linear model," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 28(2), pages 322-337, June.
    3. Bachoc, François & Genton, Mark G. & Nordhausen, Klaus & Ruiz-Gazen, Anne & Virta, Joni, 2019. "Spatial Blind Source Separation," TSE Working Papers 19-998, Toulouse School of Economics (TSE).
    4. Napoleón Vargas Jurado & Kent M. Eskridge & Stephen D. Kachman & Ronald M. Lewis, 2018. "Using a Bayesian Hierarchical Linear Mixing Model to Estimate Botanical Mixtures," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 23(2), pages 190-207, June.
    5. Legrand, Catherine & Munda, Marco & Janssen, P. & Duchateau, L., 2012. "A general class of time-varying coefficients models for right censored data," LIDAM Discussion Papers ISBA 2012041, Université catholique de Louvain, Institute of Statistics, Biostatistics and Actuarial Sciences (ISBA).
    6. James Joseph Balamuta & Steven Andrew Culpepper, 2022. "Exploratory Restricted Latent Class Models with Monotonicity Requirements under PÒLYA–GAMMA Data Augmentation," Psychometrika, Springer;The Psychometric Society, vol. 87(3), pages 903-945, September.
    7. Athanasios C. Micheas & Jiaxun Chen, 2018. "sppmix: Poisson point process modeling using normal mixture models," Computational Statistics, Springer, vol. 33(4), pages 1767-1798, December.
    8. Andrii ROSKLADKA & Roman BAIEV, 2021. "Digitalization of data analysis tools as the key for success in the online trading markets," Access Journal, Access Press Publishing House, vol. 2(3), pages 222-233, September.
    9. Johannes Friedrich & Pengcheng Zhou & Liam Paninski, 2017. "Fast online deconvolution of calcium imaging data," PLOS Computational Biology, Public Library of Science, vol. 13(3), pages 1-26, March.
    10. Etienne Côme & Nicolas Jouvin & Pierre Latouche & Charles Bouveyron, 2021. "Hierarchical clustering with discrete latent variable models and the integrated classification likelihood," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 15(4), pages 957-986, December.
    11. Mihai C. Giurcanu, 2017. "Oracle M-Estimation for Time Series Models," Journal of Time Series Analysis, Wiley Blackwell, vol. 38(3), pages 479-504, May.
    12. Moro Russ A. & Härdle Wolfgang K. & Schäfer Dorothea, 2017. "Company rating with support vector machines," Statistics & Risk Modeling, De Gruyter, vol. 34(1-2), pages 55-67, June.
    13. Aaron T L Lun & Hervé Pagès & Mike L Smith, 2018. "beachmat: A Bioconductor C++ API for accessing high-throughput biological data from a variety of R matrix types," PLOS Computational Biology, Public Library of Science, vol. 14(5), pages 1-15, May.
    14. Tilman M. Davies & Sudipto Banerjee & Adam P. Martin & Rose E. Turnbull, 2022. "A nearest‐neighbour Gaussian process spatial factor model for censored, multi‐depth geochemical data," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 71(4), pages 1014-1043, August.
    15. Meyer, Mary C. & Wang, Jianqiang C., 2012. "Improved power of one-sided tests," Statistics & Probability Letters, Elsevier, vol. 82(8), pages 1619-1622.
    16. Jean-Jacques Forneron, 2019. "A Sieve-SMM Estimator for Dynamic Models," Papers 1902.01456, arXiv.org, revised Jan 2023.
    17. Enrique Martínez García & Efthymios Pavlidis & Kostas Vasilopoulos, 2020. "exuber: Recursive Right-Tailed Unit Root Testing with R," Globalization Institute Working Papers 383, Federal Reserve Bank of Dallas, revised 19 Oct 2021.
    18. Savitsky, Terrance & Paddock, Susan, 2014. "Bayesian Semi- and Non-Parametric Models for Longitudinal Data with Multiple Membership Effects in R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 57(i03).
    19. Ana Colubi & J. Santos Dominguez-Menchero & Gil Gonzalez-Rodriguez, 2018. "New designs to consistently estimate the isotonic regression," Computational Statistics, Springer, vol. 33(2), pages 639-658, June.
    20. Battauz, Michela & Vidoni, Paolo, 2022. "A likelihood-based boosting algorithm for factor analysis models with binary data," Computational Statistics & Data Analysis, Elsevier, vol. 168(C).

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:jss:jstsof:v:061:i12. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Christopher F. Baum (email available below). General contact details of provider: http://www.jstatsoft.org/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.