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A fast community detection method in bipartite networks by distance dynamics

Author

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  • Sun, Hong-liang
  • Ch’ng, Eugene
  • Yong, Xi
  • Garibaldi, Jonathan M.
  • See, Simon
  • Chen, Duan-bing

Abstract

Many real bipartite networks are found to be divided into two-mode communities. In this paper, we formulate a new two-mode community detection algorithm BiAttractor. It is based on distance dynamics model Attractor proposed by Shao et al. with extension from unipartite to bipartite networks. Since Jaccard coefficient of distance dynamics model is incapable to measure distances of different types of vertices in bipartite networks, our main contribution is to extend distance dynamics model from unipartite to bipartite networks using a novel measure Local Jaccard Distance (LJD). Furthermore, distances between different types of vertices are not affected by common neighbors in the original method. This new idea makes clear assumptions and yields interpretable results in linear time complexity O(|E|) in sparse networks, where |E| is the number of edges. Experiments on synthetic networks demonstrate it is capable to overcome resolution limit compared with existing other methods. Further research on real networks shows that this model can accurately detect interpretable community structures in a short time.

Suggested Citation

  • Sun, Hong-liang & Ch’ng, Eugene & Yong, Xi & Garibaldi, Jonathan M. & See, Simon & Chen, Duan-bing, 2018. "A fast community detection method in bipartite networks by distance dynamics," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 496(C), pages 108-120.
  • Handle: RePEc:eee:phsmap:v:496:y:2018:i:c:p:108-120
    DOI: 10.1016/j.physa.2017.12.099
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    as
    1. Wang, Xingyuan & Qin, Xiaomeng, 2016. "Asymmetric intimacy and algorithm for detecting communities in bipartite networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 462(C), pages 569-578.
    2. He, Jialin & Chen, Duanbing, 2015. "A fast algorithm for community detection in temporal network," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 429(C), pages 87-94.
    3. Bilal, Saoud & Abdelouahab, Moussaoui, 2017. "Evolutionary algorithm and modularity for detecting communities in networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 473(C), pages 89-96.
    4. Gergely Palla & Imre Derényi & Illés Farkas & Tamás Vicsek, 2005. "Uncovering the overlapping community structure of complex networks in nature and society," Nature, Nature, vol. 435(7043), pages 814-818, June.
    5. Chen, Duanbing & Shang, Mingsheng & Lv, Zehua & Fu, Yan, 2010. "Detecting overlapping communities of weighted networks via a local algorithm," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 389(19), pages 4177-4187.
    6. Zhang, Peng & Wang, Jinliang & Li, Xiaojia & Li, Menghui & Di, Zengru & Fan, Ying, 2008. "Clustering coefficient and community structure of bipartite networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 387(27), pages 6869-6875.
    7. Chen, Duanbing & Fu, Yan & Shang, Mingsheng, 2009. "A fast and efficient heuristic algorithm for detecting community structures in complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 388(13), pages 2741-2749.
    8. Mukherjee, Animesh & Choudhury, Monojit & Ganguly, Niloy, 2011. "Understanding how both the partitions of a bipartite network affect its one-mode projection," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 390(20), pages 3602-3607.
    9. He, Jialin & Chen, Duanbing & Sun, Chongjing & Fu, Yan & Li, Wenjun, 2017. "Efficient stepwise detection of communities in temporal networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 469(C), pages 438-446.
    10. Li, Wei & Huang, Ce & Wang, Miao & Chen, Xi, 2017. "Stepping community detection algorithm based on label propagation and similarity," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 472(C), pages 145-155.
    11. Yang, Jin-Xuan & Zhang, Xiao-Dong, 2017. "Finding overlapping communities using seed set," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 467(C), pages 96-106.
    12. Tao Zhou & Linyuan Lü & Yi-Cheng Zhang, 2009. "Predicting missing links via local information," The European Physical Journal B: Condensed Matter and Complex Systems, Springer;EDP Sciences, vol. 71(4), pages 623-630, October.
    13. Peng, Hao & Zhao, Dandan & Li, Lin & Lu, Jianfeng & Han, Jianmin & Wu, Songyang, 2016. "An improved label propagation algorithm using average node energy in complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 460(C), pages 98-104.
    14. Shang, Ronghua & Zhang, Weitong & Jiao, Licheng & Stolkin, Rustam & Xue, Yu, 2017. "A community integration strategy based on an improved modularity density increment for large-scale networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 469(C), pages 471-485.
    15. Jose C Nacher & Jean-Marc Schwartz, 2012. "Modularity in Protein Complex and Drug Interactions Reveals New Polypharmacological Properties," PLOS ONE, Public Library of Science, vol. 7(1), pages 1-13, January.
    16. Hong-Liang Sun & Eugene Ch’ng & Xi Yong & Jonathan M. Garibaldi & Simon See & Duan-Bing Chen, 2017. "An improved game-theoretic approach to uncover overlapping communities," International Journal of Modern Physics C (IJMPC), World Scientific Publishing Co. Pte. Ltd., vol. 28(09), pages 1-17, September.
    17. Pan, Ying & Li, De-Hua & Liu, Jian-Guo & Liang, Jing-Zhang, 2010. "Detecting community structure in complex networks via node similarity," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 389(14), pages 2849-2857.
    18. Li-Ying Tang & Sheng-Nan Li & Jian-Hong Lin & Qiang Guo & Jian-Guo Liu, 2016. "Community structure detection based on the neighbor node degree information," International Journal of Modern Physics C (IJMPC), World Scientific Publishing Co. Pte. Ltd., vol. 27(04), pages 1-11, April.
    19. Liu, Jian & Liu, Tingzhan, 2010. "Detecting community structure in complex networks using simulated annealing with k-means algorithms," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 389(11), pages 2300-2309.
    20. Cui, Yaozu & Wang, Xingyuan, 2014. "Uncovering overlapping community structures by the key bi-community and intimate degree in bipartite networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 407(C), pages 7-14.
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    Cited by:

    1. Sun, Hong-liang & Chen, Duan-bing & He, Jia-lin & Ch’ng, Eugene, 2019. "A voting approach to uncover multiple influential spreaders on weighted networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 519(C), pages 303-312.
    2. Kong, Hanzhang & Kang, Qinma & Li, Wenquan & Liu, Chao & Kang, Yunfan & He, Hong, 2019. "A hybrid iterated carousel greedy algorithm for community detection in complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 536(C).
    3. Yubo Peng & Bofeng Zhang & Furong Chang, 2021. "Overlapping Community Detection of Bipartite Networks Based on a Novel Community Density," Future Internet, MDPI, vol. 13(4), pages 1-21, March.
    4. Jianjun Cheng & Xing Su & Haijuan Yang & Longjie Li & Jingming Zhang & Shiyan Zhao & Xiaoyun Chen, 2019. "Neighbor Similarity Based Agglomerative Method for Community Detection in Networks," Complexity, Hindawi, vol. 2019, pages 1-16, May.

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