IDEAS home Printed from https://ideas.repec.org/a/bpj/mcmeap/v26y2020i1p49-68n5.html
   My bibliography  Save this article

A Bayesian inference for the penalized spline joint models of longitudinal and time-to-event data: A prior sensitivity analysis

Author

Listed:
  • Thi Thu Pham Huong

    (Mathematical Department, An Giang University, Vietnam National University, Ho Chi Minh City, Vietnam)

  • Pham Hoa

    (Mathematical Department, An Giang University, Vietnam National University, Ho Chi Minh City, Vietnam)

  • Nur Darfiana

    (CSEM, Flinders University, Flinders at Tonley, GPO BOX 2100, Adelaide5001, South Australia, Australia)

Abstract

Bayesian approaches have been used in the literature to estimate the parameters for joint models of longitudinal and time-to-event data. The main aim of this paper is to analyze the impact of prior distributions on estimating parameters in a proposed fully Bayesian analysis setting for the penalized spline joint models. To achieve this aim, the joint posterior distribution of parameters in survival and longitudinal submodels is presented. The Markov chain Monte Carlo (MCMC) algorithm is then proposed, which consists of the Gibbs sampler (GS) and Metropolis Hastings (MH) algorithms to sample for the target conditional posterior distributions. The prior sensitivity analysis for the baseline hazard rate and association parameters is performed through simulation studies and a case study.

Suggested Citation

  • Thi Thu Pham Huong & Pham Hoa & Nur Darfiana, 2020. "A Bayesian inference for the penalized spline joint models of longitudinal and time-to-event data: A prior sensitivity analysis," Monte Carlo Methods and Applications, De Gruyter, vol. 26(1), pages 49-68, March.
  • Handle: RePEc:bpj:mcmeap:v:26:y:2020:i:1:p:49-68:n:5
    DOI: 10.1515/mcma-2020-2058
    as

    Download full text from publisher

    File URL: https://doi.org/10.1515/mcma-2020-2058
    Download Restriction: For access to full text, subscription to the journal or payment for the individual article is required.

    File URL: https://libkey.io/10.1515/mcma-2020-2058?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Wang Y. & Taylor J. M. G., 2001. "Jointly Modeling Longitudinal and Event Time Data With Application to Acquired Immunodeficiency Syndrome," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 895-905, September.
    2. Michael J. Crowther & Keith R. Abrams & Paul C. Lambert, 2013. "Joint modeling of longitudinal and survival data," Stata Journal, StataCorp LP, vol. 13(1), pages 165-184, March.
    3. Pham Thi Thu Huong & Darfiana Nur & Alan Branford, 2017. "Penalized spline joint models for longitudinal and time-to-event data," Communications in Statistics - Theory and Methods, Taylor & Francis Journals, vol. 46(20), pages 10294-10314, October.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Tang, Nian-Sheng & Tang, An-Min & Pan, Dong-Dong, 2014. "Semiparametric Bayesian joint models of multivariate longitudinal and survival data," Computational Statistics & Data Analysis, Elsevier, vol. 77(C), pages 113-129.
    2. Wei Yang & Dawei Xie & Qiang Pan & Harold I. Feldman & Wensheng Guo, 2017. "Joint Modeling of Repeated Measures and Competing Failure Events in a Study of Chronic Kidney Disease," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 9(2), pages 504-524, December.
    3. Philipson, Pete & Hickey, Graeme L. & Crowther, Michael J. & Kolamunnage-Dona, Ruwanthi, 2020. "Faster Monte Carlo estimation of joint models for time-to-event and multivariate longitudinal data," Computational Statistics & Data Analysis, Elsevier, vol. 151(C).
    4. repec:jss:jstsof:35:i09 is not listed on IDEAS
    5. Syden Mishi & Weliswa Matekenya & Leward Jeke & Ronney M. Ncwadi & Roseline T. Karambakuwa, 2021. "Firm and product survival analysis: Evidence from South African tax administrative and products data," WIDER Working Paper Series wp-2021-107, World Institute for Development Economic Research (UNU-WIDER).
    6. Murray, James & Philipson, Pete, 2023. "Fast estimation for generalised multivariate joint models using an approximate EM algorithm," Computational Statistics & Data Analysis, Elsevier, vol. 187(C).
    7. Ram Thapa & Harold E. Burkhart & Jie Li & Yili Hong, 2016. "Modeling Clustered Survival Times of Loblolly Pine with Time-dependent Covariates and Shared Frailties," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 21(1), pages 92-110, March.
    8. Rizopoulos, Dimitris, 2012. "Fast fitting of joint models for longitudinal and event time data using a pseudo-adaptive Gaussian quadrature rule," Computational Statistics & Data Analysis, Elsevier, vol. 56(3), pages 491-501.
    9. Hanze Zhang & Yangxin Huang, 2020. "Quantile regression-based Bayesian joint modeling analysis of longitudinal–survival data, with application to an AIDS cohort study," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 26(2), pages 339-368, April.
    10. Jaeun Choi & Jianwen Cai & Donglin Zeng, 2017. "Penalized Likelihood Approach for Simultaneous Analysis of Survival Time and Binary Longitudinal Outcome," Sankhya B: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 79(2), pages 190-216, November.
    11. Jiehuan Sun & Jose D. Herazo‐Maya & Philip L. Molyneaux & Toby M. Maher & Naftali Kaminski & Hongyu Zhao, 2019. "Regularized Latent Class Model for Joint Analysis of High‐Dimensional Longitudinal Biomarkers and a Time‐to‐Event Outcome," Biometrics, The International Biometric Society, vol. 75(1), pages 69-77, March.
    12. Shanshan Li, 2016. "Joint modeling of recurrent event processes and intermittently observed time-varying binary covariate processes," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 22(1), pages 145-160, January.
    13. Wang, Shikun & Li, Zhao & Lan, Lan & Zhao, Jieyi & Zheng, W. Jim & Li, Liang, 2022. "GPU accelerated estimation of a shared random effect joint model for dynamic prediction," Computational Statistics & Data Analysis, Elsevier, vol. 174(C).
    14. Y. K. Tseng & Y. R. Su & M. Mao & J. L. Wang, 2015. "An extended hazard model with longitudinal covariates," Biometrika, Biometrika Trust, vol. 102(1), pages 135-150.
    15. Jaeun Choi & Donglin Zeng & Andrew F. Olshan & Jianwen Cai, 2018. "Joint modeling of survival time and longitudinal outcomes with flexible random effects," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 24(1), pages 126-152, January.
    16. Jiawei Xu & Matthew A. Psioda & Joseph G. Ibrahim, 2023. "Bayesian Design of Clinical Trials Using Joint Cure Rate Models for Longitudinal and Time-to-Event Data," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 29(1), pages 213-233, January.
    17. Sun, Liuquan & Tong, Xingwei, 2009. "Analyzing longitudinal data with informative observation times under biased sampling," Statistics & Probability Letters, Elsevier, vol. 79(9), pages 1162-1168, May.
    18. Nuzhat B. Ashra & Michael Crowther, 2019. "Developing a postestimation command for joint models in merlin," London Stata Conference 2019 02, Stata Users Group.
    19. Chen, Chyong-Mei & Shen, Pao-sheng & Tseng, Yi-Kuan, 2018. "Semiparametric transformation joint models for longitudinal covariates and interval-censored failure time," Computational Statistics & Data Analysis, Elsevier, vol. 128(C), pages 116-127.
    20. Atanu B & Gajendra V & Jesna J & Ramesh V, 2017. "Multiple Imputations for Determining an Optimum Biological Dose of a Metronomic Chemotherapy," Biostatistics and Biometrics Open Access Journal, Juniper Publishers Inc., vol. 3(5), pages 129-140, October.
    21. Yi, Fengting & Tang, Niansheng & Sun, Jianguo, 2020. "Regression analysis of interval-censored failure time data with time-dependent covariates," Computational Statistics & Data Analysis, Elsevier, vol. 144(C).

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bpj:mcmeap:v:26:y:2020:i:1:p:49-68:n:5. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Peter Golla (email available below). General contact details of provider: https://www.degruyter.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.