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The Bayesian bridge

Author

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  • Nicholas G. Polson
  • James G. Scott
  • Jesse Windle

Abstract

type="main" xml:id="rssb12042-abs-0001"> We propose the Bayesian bridge estimator for regularized regression and classification. Two key mixture representations for the Bayesian bridge model are developed: a scale mixture of normal distributions with respect to an α-stable random variable; a mixture of Bartlett–Fejer kernels (or triangle densities) with respect to a two-component mixture of gamma random variables. Both lead to Markov chain Monte Carlo methods for posterior simulation, and these methods turn out to have complementary domains of maximum efficiency. The first representation is a well-known result due to West and is the better choice for collinear design matrices. The second representation is new and is more efficient for orthogonal problems, largely because it avoids the need to deal with exponentially tilted stable random variables. It also provides insight into the multimodality of the joint posterior distribution, which is a feature of the bridge model that is notably absent under ridge or lasso-type priors. We prove a theorem that extends this representation to a wider class of densities representable as scale mixtures of beta distributions, and we provide an explicit inversion formula for the mixing distribution. The connections with slice sampling and scale mixtures of normal distributions are explored. On the practical side, we find that the Bayesian bridge model outperforms its classical cousin in estimation and prediction across a variety of data sets, both simulated and real. We also show that the Markov chain Monte Carlo algorithm for fitting the bridge model exhibits excellent mixing properties, particularly for the global scale parameter. This makes for a favourable contrast with analogous Markov chain Monte Carlo algorithms for other sparse Bayesian models. All methods described in this paper are implemented in the R package BayesBridge. An extensive set of simulation results is provided in two on-line supplemental files.

Suggested Citation

  • Nicholas G. Polson & James G. Scott & Jesse Windle, 2014. "The Bayesian bridge," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 76(4), pages 713-733, September.
  • Handle: RePEc:bla:jorssb:v:76:y:2014:i:4:p:713-733
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    File URL: http://hdl.handle.net/10.1111/rssb.2014.76.issue-4
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    Citations

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    Cited by:

    1. Yu-Zhu Tian & Man-Lai Tang & Wai-Sum Chan & Mao-Zai Tian, 2021. "Bayesian bridge-randomized penalized quantile regression for ordinal longitudinal data, with application to firm’s bond ratings," Computational Statistics, Springer, vol. 36(2), pages 1289-1319, June.
    2. Tian, Yuzhu & Song, Xinyuan, 2020. "Bayesian bridge-randomized penalized quantile regression," Computational Statistics & Data Analysis, Elsevier, vol. 144(C).
    3. Anindya Bhadra & Jyotishka Datta & Nicholas G. Polson & Brandon T. Willard, 2020. "Global-Local Mixtures: A Unifying Framework," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 82(2), pages 426-447, August.
    4. Kohns, David & Bhattacharjee, Arnab, 2023. "Nowcasting growth using Google Trends data: A Bayesian Structural Time Series model," International Journal of Forecasting, Elsevier, vol. 39(3), pages 1384-1412.
    5. van Erp, Sara & Oberski, Daniel L. & Mulder, Joris, 2018. "Shrinkage priors for Bayesian penalized regression," OSF Preprints cg8fq, Center for Open Science.
    6. Niloy Biswas & Anirban Bhattacharya & Pierre E. Jacob & James E. Johndrow, 2022. "Coupling‐based convergence assessment of some Gibbs samplers for high‐dimensional Bayesian regression with shrinkage priors," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 84(3), pages 973-996, July.
    7. Linh H. Nghiem & Francis K.C. Hui & Samuel Müller & A.H. Welsh, 2023. "Screening methods for linear errors‐in‐variables models in high dimensions," Biometrics, The International Biometric Society, vol. 79(2), pages 926-939, June.
    8. David Kohns & Tibor Szendrei, 2020. "Horseshoe Prior Bayesian Quantile Regression," Papers 2006.07655, arXiv.org, revised Mar 2021.
    9. Mallick, Himel & Yi, Nengjun, 2017. "Bayesian group bridge for bi-level variable selection," Computational Statistics & Data Analysis, Elsevier, vol. 110(C), pages 115-133.

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