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Parameter Estimation of Partial Differential Equation Models

Author

Listed:
  • Xiaolei Xun
  • Jiguo Cao
  • Bani Mallick
  • Arnab Maity
  • Raymond J. Carroll

Abstract

Partial differential equation (PDE) models are commonly used to model complex dynamic systems in applied sciences such as biology and finance. The forms of these PDE models are usually proposed by experts based on their prior knowledge and understanding of the dynamic system. Parameters in PDE models often have interesting scientific interpretations, but their values are often unknown and need to be estimated from the measurements of the dynamic system in the presence of measurement errors. Most PDEs used in practice have no analytic solutions, and can only be solved with numerical methods. Currently, methods for estimating PDE parameters require repeatedly solving PDEs numerically under thousands of candidate parameter values, and thus the computational load is high. In this article, we propose two methods to estimate parameters in PDE models: a parameter cascading method and a Bayesian approach. In both methods, the underlying dynamic process modeled with the PDE model is represented via basis function expansion. For the parameter cascading method, we develop two nested levels of optimization to estimate the PDE parameters. For the Bayesian method, we develop a joint model for data and the PDE and develop a novel hierarchical model allowing us to employ Markov chain Monte Carlo (MCMC) techniques to make posterior inference. Simulation studies show that the Bayesian method and parameter cascading method are comparable, and both outperform other available methods in terms of estimation accuracy. The two methods are demonstrated by estimating parameters in a PDE model from long-range infrared light detection and ranging data. Supplementary materials for this article are available online.

Suggested Citation

  • Xiaolei Xun & Jiguo Cao & Bani Mallick & Arnab Maity & Raymond J. Carroll, 2013. "Parameter Estimation of Partial Differential Equation Models," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 108(503), pages 1009-1020, September.
  • Handle: RePEc:taf:jnlasa:v:108:y:2013:i:503:p:1009-1020
    DOI: 10.1080/01621459.2013.794730
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    Citations

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    Cited by:

    1. Laura M. Sangalli, 2021. "Spatial Regression With Partial Differential Equation Regularisation," International Statistical Review, International Statistical Institute, vol. 89(3), pages 505-531, December.
    2. Calcina, Sabrina S. & Gameiro, Marcio, 2021. "Parameter estimation in systems exhibiting spatially complex solutions via persistent homology and machine learning," Mathematics and Computers in Simulation (MATCOM), Elsevier, vol. 185(C), pages 719-732.
    3. Mu Niu & Benn Macdonald & Simon Rogers & Maurizio Filippone & Dirk Husmeier, 2018. "Statistical inference in mechanistic models: time warping for improved gradient matching," Computational Statistics, Springer, vol. 33(2), pages 1091-1123, June.
    4. Arnone, Eleonora & Azzimonti, Laura & Nobile, Fabio & Sangalli, Laura M., 2019. "Modeling spatially dependent functional data via regression with differential regularization," Journal of Multivariate Analysis, Elsevier, vol. 170(C), pages 275-295.
    5. Li, Jiayang & Zhang, Zhikun & Dai, Min & Ming, Ju & Wang, Xiangjun, 2023. "Diffusion equations with Markovian switching: Well-posedness, numerical generation and parameter inference," Chaos, Solitons & Fractals, Elsevier, vol. 171(C).
    6. Aydogmus, Ozgur & TOR, Ali Hakan, 2021. "A Modified Multiple Shooting Algorithm for Parameter Estimation in ODEs Using Adjoint Sensitivity Analysis," Applied Mathematics and Computation, Elsevier, vol. 390(C).
    7. Laura Azzimonti & Laura M. Sangalli & Piercesare Secchi & Maurizio Domanin & Fabio Nobile, 2015. "Blood Flow Velocity Field Estimation Via Spatial Regression With PDE Penalization," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 110(511), pages 1057-1071, September.
    8. Y. Villacampa & F. J. Navarro-González, 2022. "An Algorithm for Numerical Integration of ODE with Sampled Unknown Functional Factors," Mathematics, MDPI, vol. 10(9), pages 1-23, May.
    9. Gianluca Frasso & Jonathan Jaeger & Philippe Lambert, 2016. "Parameter estimation and inference in dynamic systems described by linear partial differential equations," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 100(3), pages 259-287, July.
    10. Xinyu Zhang & Jiguo Cao & Raymond J. Carroll, 2017. "Estimating varying coefficients for partial differential equation models," Biometrics, The International Biometric Society, vol. 73(3), pages 949-959, September.
    11. Bernardi, Mara S. & Carey, Michelle & Ramsay, James O. & Sangalli, Laura M., 2018. "Modeling spatial anisotropy via regression with partial differential regularization," Journal of Multivariate Analysis, Elsevier, vol. 167(C), pages 15-30.
    12. Hanwen Huang & Andreas Handel & Xiao Song, 2020. "A Bayesian approach to estimate parameters of ordinary differential equation," Computational Statistics, Springer, vol. 35(3), pages 1481-1499, September.
    13. Elaine A. Ferguson & Jason Matthiopoulos & Robert H. Insall & Dirk Husmeier, 2017. "Statistical inference of the mechanisms driving collective cell movement," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 66(4), pages 869-890, August.

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