IDEAS home Printed from https://ideas.repec.org/a/spr/scient/v126y2021i6d10.1007_s11192-021-03900-7.html
   My bibliography  Save this article

Day-to-day discovery of preprint–publication links

Author

Listed:
  • Guillaume Cabanac

    (University of Toulouse)

  • Theodora Oikonomidi

    (Université de Paris, Centre of Research in Epidemiology and Statistics (CRESS))

  • Isabelle Boutron

    (Université de Paris, Centre of Research in Epidemiology and Statistics (CRESS)
    AP-HP, Hôpital Hôtel Dieu
    Cochrane France)

Abstract

Preprints promote the open and fast communication of non-peer reviewed work. Once a preprint is published in a peer-reviewed venue, the preprint server updates its web page: a prominent hyperlink leading to the newly published work is added. Linking preprints to publications is of utmost importance as it provides readers with the latest version of a now certified work. Yet leading preprint servers fail to identify all existing preprint–publication links. This limitation calls for a more thorough approach to this critical information retrieval task: overlooking published evidence translates into partial and even inaccurate systematic reviews on health-related issues, for instance. We designed an algorithm leveraging the Crossref public and free source of bibliographic metadata to comb the literature for preprint–publication links. We tested it on a reference preprint set identified and curated for a living systematic review on interventions for preventing and treating COVID-19 performed by international collaboration: the COVID-NMA initiative ( covid-nma.com ). The reference set comprised 343 preprints, 121 of which appeared as a publication in a peer-reviewed journal. While the preprint servers identified 39.7% of the preprint–publication links, our linker identified 90.9% of the expected links with no clues taken from the preprint servers. The accuracy of the proposed linker is 91.5% on this reference set, with 90.9% sensitivity and 91.9% specificity. This is a 16.26% increase in accuracy compared to that of preprint servers. We release this software as supplementary material to foster its integration into preprint servers’ workflows and enhance a daily preprint–publication chase that is useful to all readers, including systematic reviewers. This preprint–publication linker currently provides day-to-day updates to the biomedical experts of the COVID-NMA initiative.

Suggested Citation

  • Guillaume Cabanac & Theodora Oikonomidi & Isabelle Boutron, 2021. "Day-to-day discovery of preprint–publication links," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(6), pages 5285-5304, June.
  • Handle: RePEc:spr:scient:v:126:y:2021:i:6:d:10.1007_s11192-021-03900-7
    DOI: 10.1007/s11192-021-03900-7
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s11192-021-03900-7
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s11192-021-03900-7?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Adam Palayew & Ole Norgaard & Kelly Safreed-Harmon & Tue Helms Andersen & Lauge Neimann Rasmussen & Jeffrey V. Lazarus, 2020. "Pandemic publishing poses a new COVID-19 challenge," Nature Human Behaviour, Nature, vol. 4(7), pages 666-669, July.
    2. Jialiang Lin & Yao Yu & Yu Zhou & Zhiyang Zhou & Xiaodong Shi, 2020. "How many preprints have actually been printed and why: a case study of computer science preprints on arXiv," Scientometrics, Springer;Akadémiai Kiadó, vol. 124(1), pages 555-574, July.
    3. Vincent Larivière & Cassidy R. Sugimoto & Benoit Macaluso & Staša Milojević & Blaise Cronin & Mike Thelwall, 2014. "arXiv E-prints and the journal of record: An analysis of roles and relationships," Journal of the Association for Information Science & Technology, Association for Information Science & Technology, vol. 65(6), pages 1157-1169, June.
    4. Julian H Elliott & Tari Turner & Ornella Clavisi & James Thomas & Julian P T Higgins & Chris Mavergames & Russell L Gruen, 2014. "Living Systematic Reviews: An Emerging Opportunity to Narrow the Evidence-Practice Gap," PLOS Medicine, Public Library of Science, vol. 11(2), pages 1-6, February.
    5. Alexandra Baumann & Klaus Wohlrabe, 2020. "Where have all the working papers gone? Evidence from four major economics working paper series," Scientometrics, Springer;Akadémiai Kiadó, vol. 124(3), pages 2433-2441, September.
    6. Diana Kwon, 2020. "How swamped preprint servers are blocking bad coronavirus research," Nature, Nature, vol. 581(7807), pages 130-131, May.
    7. J. Homolak & I. Kodvanj & D. Virag, 2020. "Preliminary analysis of COVID-19 academic information patterns: a call for open science in the times of closed borders," Scientometrics, Springer;Akadémiai Kiadó, vol. 124(3), pages 2687-2701, September.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Annie Collins & Rohan Alexander, 2022. "Reproducibility of COVID-19 pre-prints," Scientometrics, Springer;Akadémiai Kiadó, vol. 127(8), pages 4655-4673, August.
    2. Marc Bertin & Iana Atanassova, 2022. "Preprint citation practice in PLOS," Scientometrics, Springer;Akadémiai Kiadó, vol. 127(12), pages 6895-6912, December.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Constantin Bürgi & Klaus Wohlrabe, 2022. "The influence of Covid-19 on publications in economics: bibliometric evidence from five working paper series," Scientometrics, Springer;Akadémiai Kiadó, vol. 127(9), pages 5175-5189, September.
    2. Ivan Kodvanj & Jan Homolak & Davor Virag & Vladimir Trkulja, 2022. "Publishing of COVID-19 preprints in peer-reviewed journals, preprinting trends, public discussion and quality issues," Scientometrics, Springer;Akadémiai Kiadó, vol. 127(3), pages 1339-1352, March.
    3. E. Sachini & K. Sioumalas-Christodoulou & C. Chrysomallidis & G. Siganos & N. Bouras & N. Karampekios, 2021. "COVID-19 enabled co-authoring networks: a country-case analysis," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(6), pages 5225-5244, June.
    4. Török, Ádám & Konka, Boglárka & Nagy, Andrea Magda, 2023. "A koronavírus-járvány a közgazdasági szakirodalomban. Egy új határterület tudománymetriai elemzése [The coronavirus pandemic in the economics literature. The scientometric analysis of a new discipl," Közgazdasági Szemle (Economic Review - monthly of the Hungarian Academy of Sciences), Közgazdasági Szemle Alapítvány (Economic Review Foundation), vol. 0(3), pages 284-304.
    5. Guillaume Cabanac & Ingo Frommholz & Philipp Mayr, 2020. "Scholarly literature mining with information retrieval and natural language processing: Preface," Scientometrics, Springer;Akadémiai Kiadó, vol. 125(3), pages 2835-2840, December.
    6. Alexandra Baumann & Klaus Wohlrabe, 2020. "Where have all the working papers gone? Evidence from four major economics working paper series," Scientometrics, Springer;Akadémiai Kiadó, vol. 124(3), pages 2433-2441, September.
    7. Gabriela F. Nane & Nicolas Robinson-Garcia & François Schalkwyk & Daniel Torres-Salinas, 2023. "COVID-19 and the scientific publishing system: growth, open access and scientific fields," Scientometrics, Springer;Akadémiai Kiadó, vol. 128(1), pages 345-362, January.
    8. Piotr Śpiewanowski & Oleksandr Talavera, 2021. "Journal rankings and publication strategy," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(4), pages 3227-3242, April.
    9. Citron, Daniel T. & Way, Samuel F., 2018. "Network assembly of scientific communities of varying size and specificity," Journal of Informetrics, Elsevier, vol. 12(1), pages 181-190.
    10. Josip Strcic & Antonia Civljak & Terezija Glozinic & Rafael Leite Pacheco & Tonci Brkovic & Livia Puljak, 2022. "Open data and data sharing in articles about COVID-19 published in preprint servers medRxiv and bioRxiv," Scientometrics, Springer;Akadémiai Kiadó, vol. 127(5), pages 2791-2802, May.
    11. Quan-Hoang Vuong & Tam-Tri Le & Viet-Phuong La & Huyen Thanh Thanh Nguyen & Manh-Toan Ho & Quy Khuc & Minh-Hoang Nguyen, 2022. "Covid-19 vaccines production and societal immunization under the serendipity-mindsponge-3D knowledge management theory and conceptual framework," Palgrave Communications, Palgrave Macmillan, vol. 9(1), pages 1-12, December.
    12. Tang, Xuli & Li, Xin & Ding, Ying & Song, Min & Bu, Yi, 2020. "The pace of artificial intelligence innovations: Speed, talent, and trial-and-error," Journal of Informetrics, Elsevier, vol. 14(4).
    13. Manh-Toan Ho & Ngoc-Thang B. Le & Manh-Tung Ho & Quan-Hoang Vuong, 2022. "A bibliometric review on development economics research in Vietnam from 2008 to 2020," Quality & Quantity: International Journal of Methodology, Springer, vol. 56(5), pages 2939-2969, October.
    14. Shelly X Bian & Eugene Lin, 2020. "Competing with a pandemic: Trends in research design in a time of Covid-19," PLOS ONE, Public Library of Science, vol. 15(9), pages 1-14, September.
    15. Klaus Wohlrabe & Constantin Bürgi, 2021. "What is the benefit from publishing a working paper in a journal in terms of citations? Evidence from economics," Scientometrics, Springer;Akadémiai Kiadó, vol. 126(6), pages 4701-4714, June.
    16. Jialiang Lin & Yao Yu & Yu Zhou & Zhiyang Zhou & Xiaodong Shi, 2020. "How many preprints have actually been printed and why: a case study of computer science preprints on arXiv," Scientometrics, Springer;Akadémiai Kiadó, vol. 124(1), pages 555-574, July.
    17. Hafiz Suliman Munawar & Hina Inam & Fahim Ullah & Siddra Qayyum & Abbas Z. Kouzani & M. A. Parvez Mahmud, 2021. "Towards Smart Healthcare: UAV-Based Optimized Path Planning for Delivering COVID-19 Self-Testing Kits Using Cutting Edge Technologies," Sustainability, MDPI, vol. 13(18), pages 1-21, September.
    18. Wang, Zhiqi & Chen, Yue & Glänzel, Wolfgang, 2020. "Preprints as accelerator of scholarly communication: An empirical analysis in Mathematics," Journal of Informetrics, Elsevier, vol. 14(4).
    19. Anna Walaszczyk & Małgorzata Koszewska & Iwona Staniec, 2022. "Food Traceability as an Element of Sustainable Consumption—Pandemic-Driven Changes in Consumer Attitudes," IJERPH, MDPI, vol. 19(9), pages 1-18, April.
    20. Marc Bertin & Iana Atanassova, 2022. "Preprint citation practice in PLOS," Scientometrics, Springer;Akadémiai Kiadó, vol. 127(12), pages 6895-6912, December.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:scient:v:126:y:2021:i:6:d:10.1007_s11192-021-03900-7. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.