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Area under Precision-Recall Curves for Weighted and Unweighted Data

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  • Jens Keilwagen
  • Ivo Grosse
  • Jan Grau

Abstract

Precision-recall curves are highly informative about the performance of binary classifiers, and the area under these curves is a popular scalar performance measure for comparing different classifiers. However, for many applications class labels are not provided with absolute certainty, but with some degree of confidence, often reflected by weights or soft labels assigned to data points. Computing the area under the precision-recall curve requires interpolating between adjacent supporting points, but previous interpolation schemes are not directly applicable to weighted data. Hence, even in cases where weights were available, they had to be neglected for assessing classifiers using precision-recall curves. Here, we propose an interpolation for precision-recall curves that can also be used for weighted data, and we derive conditions for classification scores yielding the maximum and minimum area under the precision-recall curve. We investigate accordances and differences of the proposed interpolation and previous ones, and we demonstrate that taking into account existing weights of test data is important for the comparison of classifiers.

Suggested Citation

  • Jens Keilwagen & Ivo Grosse & Jan Grau, 2014. "Area under Precision-Recall Curves for Weighted and Unweighted Data," PLOS ONE, Public Library of Science, vol. 9(3), pages 1-13, March.
  • Handle: RePEc:plo:pone00:0092209
    DOI: 10.1371/journal.pone.0092209
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    Cited by:

    1. W. Frank Lenoir & Micaela Morgado & Peter C. DeWeirdt & Megan McLaughlin & Audrey L. Griffith & Annabel K. Sangree & Marissa N. Feeley & Nazanin Esmaeili Anvar & Eiru Kim & Lori L. Bertolet & Medina C, 2021. "Discovery of putative tumor suppressors from CRISPR screens reveals rewired lipid metabolism in acute myeloid leukemia cells," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
    2. Wahid-Ul-Ashraf, Akanda & Budka, Marcin & Musial, Katarzyna, 2019. "How to predict social relationships — Physics-inspired approach to link prediction," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 523(C), pages 1110-1129.
    3. Kajal Lahiri & Cheng Yang, 2023. "ROC and PRC Approaches to Evaluate Recession Forecasts," Journal of Business Cycle Research, Springer;Centre for International Research on Economic Tendency Surveys (CIRET), vol. 19(2), pages 119-148, September.
    4. Stan Hatko, 2017. "The Bank of Canada 2015 Retailer Survey on the Cost of Payment Methods: Nonresponse," Technical Reports 107, Bank of Canada.
    5. T. Villmann & M. Kaden & W. Hermann & M. Biehl, 2018. "Learning vector quantization classifiers for ROC-optimization," Computational Statistics, Springer, vol. 33(3), pages 1173-1194, September.

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