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Navigation strategies in Caenorhabditis elegans are differentially altered by learning

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  • Kevin S Chen
  • Anuj K Sharma
  • Jonathan W Pillow
  • Andrew M Leifer

Abstract

Learned olfactory-guided navigation is a powerful platform for studying how a brain generates goal-directed behaviors. However, the quantitative changes that occur in sensorimotor transformations and the underlying neural circuit substrates to generate such learning-dependent navigation is still unclear. Here we investigate learned sensorimotor processing for navigation in the nematode Caenorhabditis elegans by measuring and modeling experience-dependent odor and salt chemotaxis. We then explore the neural basis of learned odor navigation through perturbation experiments. We develop a novel statistical model to characterize how the worm employs two behavioral strategies: a biased random walk and weathervaning. We infer weights on these strategies and characterize sensorimotor kernels that govern them by fitting our model to the worm’s time-varying navigation trajectories and precise sensory experiences. After olfactory learning, the fitted odor kernels reflect how appetitive and aversive trained worms up- and down-regulate both strategies, respectively. The model predicts an animal’s past olfactory learning experience with > 90% accuracy given finite observations, outperforming a classical chemotaxis metric. The model trained on natural odors further predicts the animals’ learning-dependent response to optogenetically induced odor perception. Our measurements and model show that behavioral variability is altered by learning—trained worms exhibit less variable navigation than naive ones. Genetically disrupting individual interneuron classes downstream of an odor-sensing neuron reveals that learned navigation strategies are distributed in the network. Together, we present a flexible navigation algorithm that is supported by distributed neural computation in a compact brain.Author summary: Learning is a feature of species across scales. How does the brain flexibly learn to produce complex behavior? We focus on C. elegans to study how navigation strategies depend on olfactory learning by utilizing precise measurements and a novel model. The fitted model shows that learning alters two known navigation strategies in worms and the model outperforms a classical metric in decoding the animal’s past learning experience. We discover that learned navigation can express itself in a context-dependent manner. In addition, through perturbing individual interneurons, we find that most neurons’ contributions are distributed across strategies and are differentially altered by learning. We expect these flexible behavioral algorithms and neural computations to be generalized to other species and behavior. How do worms navigate based on learned experience? This study presents a statistical model and in vivo experimental data to reveal flexible behavioral strategies and distributed neural computations that underlie learning-dependent odor navigation in Caenorhabditis elegans.

Suggested Citation

  • Kevin S Chen & Anuj K Sharma & Jonathan W Pillow & Andrew M Leifer, 2025. "Navigation strategies in Caenorhabditis elegans are differentially altered by learning," PLOS Biology, Public Library of Science, vol. 23(3), pages 1-24, March.
  • Handle: RePEc:plo:pbio00:3003005
    DOI: 10.1371/journal.pbio.3003005
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    References listed on IDEAS

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    1. Yun Zhang & Hang Lu & Cornelia I. Bargmann, 2005. "Pathogenic bacteria induce aversive olfactory learning in Caenorhabditis elegans," Nature, Nature, vol. 438(7065), pages 179-184, November.
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