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Gut commensal Bifidobacterium-derived extracellular vesicles modulate the therapeutic effects of anti-PD-1 in lung cancer

Author

Listed:
  • Ranjan Preet

    (University of Kansas Medical Center)

  • Md Atiqul Islam

    (University of Kansas Medical Center)

  • Jiyoung Shim

    (University of Kansas Medical Center)

  • Ganeshkumar Rajendran

    (University of Kansas Medical Center)

  • Amrita Mitra

    (University of Kansas Medical Center)

  • Vikalp Vishwakarma

    (University of Kansas Medical Center)

  • Caleb Kutz

    (University of Kansas Medical Center)

  • Sonali Choudhury

    (University of Kansas Comprehensive Cancer Center)

  • Harsh Pathak

    (University of Kansas Medical Center)

  • Qun Dai

    (University of Kansas Medical Center)

  • Weijing Sun

    (University of Kansas Medical Center)

  • Rashna Madan

    (University of Kansas Medical Center)

  • Cuncong Zhong

    (University of Kansas)

  • Mary A. Markiewicz

    (University of Kansas Medical Center)

  • Jun Zhang

    (University of Kansas Medical Center
    University of Kansas Comprehensive Cancer Center)

Abstract

Lung cancer is the leading cause of cancer-related deaths worldwide. Although immunotherapy such as anti-programmed death-1 and its ligand 1 (PD-1/L1) is a standard treatment for advanced non-small cell lung cancer (NSCLC), many patients do not derive benefit directly. Several studies have elucidated new strategies to improve the antitumor immune response through gut microbiota modulation. However, it remains largely debatable regarding how gut microbiota remotely affect lung cancer microenvironment and subsequently modulate immunotherapy response. Here we show that commensal Bifidobacterium-derived extracellular vesicles (Bif.BEVs) can modulate the therapeutic effect of anti-PD-1 therapy in NSCLC. These Bif.BEVs are up-taken by lung cancer cells predominantly via dynamin-dependent endocytosis and upregulate PD-L1 expression through TLR4-NF-κB pathway. They also efficiently penetrate murine intestinal and patient-derived lung cancer organoids. Oral gavage of these Bif.BEVs result in their accumulation in tumors in mice. Using a syngeneic mouse model, Bif.BEVs are found to synergize the anti-tumor effect of anti-PD-1 via modulation of key cytokines, immune response and oncogenic pathways, and increase in tumor-infiltrating CD8+ T cells. Our study therefore identifies a link between Bif.BEVs and the tumor microenvironment, providing an alternative mechanism to explain how gut microbiota can influence immunotherapy response, particularly in tumors located anatomically distant from the gut.

Suggested Citation

  • Ranjan Preet & Md Atiqul Islam & Jiyoung Shim & Ganeshkumar Rajendran & Amrita Mitra & Vikalp Vishwakarma & Caleb Kutz & Sonali Choudhury & Harsh Pathak & Qun Dai & Weijing Sun & Rashna Madan & Cuncon, 2025. "Gut commensal Bifidobacterium-derived extracellular vesicles modulate the therapeutic effects of anti-PD-1 in lung cancer," Nature Communications, Nature, vol. 16(1), pages 1-19, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-58553-4
    DOI: 10.1038/s41467-025-58553-4
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    1. Florie Bertrand & Anne Montfort & Elie Marcheteau & Caroline Imbert & Julia Gilhodes & Thomas Filleron & Philippe Rochaix & Nathalie Andrieu-Abadie & Thierry Levade & Nicolas Meyer & Céline Colacios &, 2017. "TNFα blockade overcomes resistance to anti-PD-1 in experimental melanoma," Nature Communications, Nature, vol. 8(1), pages 1-13, December.
    2. Minsuh Kim & Hyemin Mun & Chang Oak Sung & Eun Jeong Cho & Hye-Joon Jeon & Sung-Min Chun & Da Jung Jung & Tae Hoon Shin & Gi Seok Jeong & Dong Kwan Kim & Eun Kyung Choi & Seong-Yun Jeong & Alison M. T, 2019. "Patient-derived lung cancer organoids as in vitro cancer models for therapeutic screening," Nature Communications, Nature, vol. 10(1), pages 1-15, December.
    3. Pingfeng Zhang & Zheng Liu, 2024. "Structural insights into the transporting and catalyzing mechanism of DltB in LTA D-alanylation," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
    4. Oh Youn Kim & Hyun Taek Park & Nhung Thi Hong Dinh & Seng Jin Choi & Jaewook Lee & Ji Hyun Kim & Seung-Woo Lee & Yong Song Gho, 2017. "Bacterial outer membrane vesicles suppress tumor by interferon-γ-mediated antitumor response," Nature Communications, Nature, vol. 8(1), pages 1-9, December.
    5. Guillem Lambies & Szu-Wei Lee & Karen Duong-Polk & Pedro Aza-Blanc & Swetha Maganti & Cheska M. Galapate & Anagha Deshpande & Aniruddha J. Deshpande & David A. Scott & David W. Dawson & Cosimo Commiss, 2024. "Cell polarity proteins promote macropinocytosis in response to metabolic stress," Nature Communications, Nature, vol. 15(1), pages 1-21, December.
    6. Wanbiao Chen & Rongfeng Zou & Yi Mei & Jiawei Li & Yumi Xuan & Bing Cui & Junjie Zou & Juncheng Wang & Shaoquan Lin & Zhe Zhang & Chongyuan Wang, 2024. "Structural insights into drug transport by an aquaglyceroporin," Nature Communications, Nature, vol. 15(1), pages 1-10, December.
    7. Joon Seok Park & Francesca S. Gazzaniga & Meng Wu & Amalia K. Luthens & Jacob Gillis & Wen Zheng & Martin W. LaFleur & Sarah B. Johnson & Golnaz Morad & Elizabeth M. Park & Yifan Zhou & Stephanie S. W, 2023. "Targeting PD-L2–RGMb overcomes microbiome-related immunotherapy resistance," Nature, Nature, vol. 617(7960), pages 377-385, May.
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