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Allosteric activation of cell wall synthesis during bacterial growth

Author

Listed:
  • Irina Shlosman

    (Harvard Medical School)

  • Elayne M. Fivenson

    (Harvard Medical School)

  • Morgan S. A. Gilman

    (Harvard Medical School)

  • Tyler A. Sisley

    (Harvard Medical School)

  • Suzanne Walker

    (Harvard Medical School)

  • Thomas G. Bernhardt

    (Harvard Medical School
    Harvard Medical School)

  • Andrew C. Kruse

    (Harvard Medical School)

  • Joseph J. Loparo

    (Harvard Medical School)

Abstract

The peptidoglycan (PG) cell wall protects bacteria against osmotic lysis and determines cell shape, making this structure a key antibiotic target. Peptidoglycan is a polymer of glycan chains connected by peptide crosslinks, and its synthesis requires precise spatiotemporal coordination between glycan polymerization and crosslinking. However, the molecular mechanism by which these reactions are initiated and coupled is unclear. Here we use single-molecule FRET and cryo-EM to show that an essential PG synthase (RodA-PBP2) responsible for bacterial elongation undergoes dynamic exchange between closed and open states. Structural opening couples the activation of polymerization and crosslinking and is essential in vivo. Given the high conservation of this family of synthases, the opening motion that we uncovered likely represents a conserved regulatory mechanism that controls the activation of PG synthesis during other cellular processes, including cell division.

Suggested Citation

  • Irina Shlosman & Elayne M. Fivenson & Morgan S. A. Gilman & Tyler A. Sisley & Suzanne Walker & Thomas G. Bernhardt & Andrew C. Kruse & Joseph J. Loparo, 2023. "Allosteric activation of cell wall synthesis during bacterial growth," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-39037-9
    DOI: 10.1038/s41467-023-39037-9
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    References listed on IDEAS

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    1. Alexander J. Meeske & Eammon P. Riley & William P. Robins & Tsuyoshi Uehara & John J. Mekalanos & Daniel Kahne & Suzanne Walker & Andrew C. Kruse & Thomas G. Bernhardt & David Z. Rudner, 2016. "SEDS proteins are a widespread family of bacterial cell wall polymerases," Nature, Nature, vol. 537(7622), pages 634-638, September.
    2. Nathanael A. Caveney & Sean D. Workman & Rui Yan & Claire E. Atkinson & Zhiheng Yu & Natalie C. J. Strynadka, 2021. "CryoEM structure of the antibacterial target PBP1b at 3.3 Å resolution," Nature Communications, Nature, vol. 12(1), pages 1-7, December.
    3. Dan Song & Thomas G. W. Graham & Joseph J. Loparo, 2016. "A general approach to visualize protein binding and DNA conformation without protein labelling," Nature Communications, Nature, vol. 7(1), pages 1-7, April.
    4. Hansjörg Götzke & Markus Kilisch & Markel Martínez-Carranza & Shama Sograte-Idrissi & Abirami Rajavel & Thomas Schlichthaerle & Niklas Engels & Ralf Jungmann & Pål Stenmark & Felipe Opazo & Steffen Fr, 2019. "The ALFA-tag is a highly versatile tool for nanobody-based bioscience applications," Nature Communications, Nature, vol. 10(1), pages 1-12, December.
    5. Carlos Contreras-Martel & Alexandre Martins & Chantal Ecobichon & Daniel Maragno Trindade & Pierre-Jean Matteï & Samia Hicham & Pierre Hardouin & Meriem El Ghachi & Ivo G. Boneca & Andréa Dessen, 2017. "Molecular architecture of the PBP2–MreC core bacterial cell wall synthesis complex," Nature Communications, Nature, vol. 8(1), pages 1-10, December.
    6. Robert D. Turner & Stéphane Mesnage & Jamie K. Hobbs & Simon J. Foster, 2018. "Molecular imaging of glycan chains couples cell-wall polysaccharide architecture to bacterial cell morphology," Nature Communications, Nature, vol. 9(1), pages 1-8, December.
    7. Megan Sjodt & Kelly Brock & Genevieve Dobihal & Patricia D. A. Rohs & Anna G. Green & Thomas A. Hopf & Alexander J. Meeske & Veerasak Srisuknimit & Daniel Kahne & Suzanne Walker & Debora S. Marks & Th, 2018. "Structure of the peptidoglycan polymerase RodA resolved by evolutionary coupling analysis," Nature, Nature, vol. 556(7699), pages 118-121, April.
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    Cited by:

    1. Rie Nygaard & Chris L. B. Graham & Meagan Belcher Dufrisne & Jonathan D. Colburn & Joseph Pepe & Molly A. Hydorn & Silvia Corradi & Chelsea M. Brown & Khuram U. Ashraf & Owen N. Vickery & Nicholas S. , 2023. "Structural basis of peptidoglycan synthesis by E. coli RodA-PBP2 complex," Nature Communications, Nature, vol. 14(1), pages 1-15, December.

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