IDEAS home Printed from https://ideas.repec.org/a/eee/ecomod/v221y2010i21p2576-2581.html
   My bibliography  Save this article

Updating coarse-scale species distribution models using small fine-scale samples

Author

Listed:
  • Gastón, Aitor
  • García-Viñas, Juan I.

Abstract

Large, fine-grained samples are ideal for predictive species distribution models used for management purposes, but such datasets are not available for most species and conducting such surveys is costly. We attempted to overcome this obstacle by updating previously available coarse-grained logistic regression models with small fine-grained samples using a recalibration approach. Recalibration involves re-estimation of the intercept or slope of the linear predictor and may improve calibration (level of agreement between predicted and actual probabilities). If reliable estimates of occurrence likelihood are required (e.g., for species selection in ecological restoration) calibration should be preferred to other model performance measures. This updating approach is not expected to improve discrimination (the ability of the model to rank sites according to species suitability), because the rank order of predictions is not altered. We tested different updating methods and sample sizes with tree distribution data from Spain. Updated models were compared to models fitted using only fine-grained data (refitted models). Updated models performed reasonably well at fine scales and outperformed refitted models with small samples (10–100 occurrences). If a coarse-grained model is available (or could be easily developed) and fine-grained predictions are to be generated from a limited sample size, updating previous models may be a more accurate option than fitting a new model. Our results encourage further studies on model updating in other situations where species distribution models are used under different conditions from their training (e.g., different time periods, different regions).

Suggested Citation

  • Gastón, Aitor & García-Viñas, Juan I., 2010. "Updating coarse-scale species distribution models using small fine-scale samples," Ecological Modelling, Elsevier, vol. 221(21), pages 2576-2581.
  • Handle: RePEc:eee:ecomod:v:221:y:2010:i:21:p:2576-2581
    DOI: 10.1016/j.ecolmodel.2010.07.016
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0304380010003716
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.ecolmodel.2010.07.016?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:ecomod:v:221:y:2010:i:21:p:2576-2581. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/ecological-modelling .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.