IDEAS home Printed from https://ideas.repec.org/a/eee/csdana/v147y2020ics0167947320300335.html
   My bibliography  Save this article

Joint model-free feature screening for ultra-high dimensional semi-competing risks data

Author

Listed:
  • Lu, Shuiyun
  • Chen, Xiaolin
  • Xu, Sheng
  • Liu, Chunling

Abstract

High-dimensional semi-competing risks data consisting of two probably correlated events, namely terminal event and non-terminal event, arise commonly in many biomedical studies. However, the corresponding statistical analysis is rarely investigated. A joint model-free feature screening procedure for both terminal and non-terminal events is proposed, which could allow the associated covariates to be in an ultra-high dimensional feature space. The joint screening utility is constructed from distance correlation between each predictor’s survival function and joint survival function of terminal and non-terminal events. Under rather mild technical assumptions, it is demonstrated that the proposed joint feature screening procedure enjoys sure screening and consistency in ranking properties. An adaptive threshold rule is further suggested to simultaneously identify important covariates and determine number of these covariates. Extensive numerical studies are conducted to examine the finite-sample performance of the proposed methods. Lastly, the suggested joint feature screening procedure is illustrated through a real example.

Suggested Citation

  • Lu, Shuiyun & Chen, Xiaolin & Xu, Sheng & Liu, Chunling, 2020. "Joint model-free feature screening for ultra-high dimensional semi-competing risks data," Computational Statistics & Data Analysis, Elsevier, vol. 147(C).
    • Handle: RePEc:eee:csdana:v:147:y:2020:i:c:s0167947320300335
    DOI: 10.1016/j.csda.2020.106942
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0167947320300335
    Download Restriction: Full text for ScienceDirect subscribers only.
    File URL: https://libkey.io/10.1016/j.csda.2020.106942?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Jingyuan Liu & Runze Li & Rongling Wu, 2014. "Feature Selection for Varying Coefficient Models With Ultrahigh-Dimensional Covariates," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 109(505), pages 266-274, March.
    2. Xiaolin Chen & Xiaojing Chen & Yi Liu, 2019. "A note on quantile feature screening via distance correlation," Statistical Papers, Springer, vol. 60(5), pages 1741-1762, October.
    3. Zhixuan Fu & Chirag R. Parikh & Bingqing Zhou, 2017. "Penalized variable selection in competing risks regression," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 23(3), pages 353-376, July.
    4. Huazhen Lin & Ling Zhou & Chunhong Li & Yi Li, 2014. "Semiparametric transformation models for semicompeting survival data," Biometrics, The International Biometric Society, vol. 70(3), pages 599-607, September.
    5. Hao Helen Zhang & Wenbin Lu, 2007. "Adaptive Lasso for Cox's proportional hazards model," Biometrika, Biometrika Trust, vol. 94(3), pages 691-703.
    6. Lai, Peng & Liu, Yiming & Liu, Zhi & Wan, Yi, 2017. "Model free feature screening for ultrahigh dimensional data with responses missing at random," Computational Statistics & Data Analysis, Elsevier, vol. 105(C), pages 201-216.
    7. Zhao, Sihai Dave & Li, Yi, 2012. "Principled sure independence screening for Cox models with ultra-high-dimensional covariates," Journal of Multivariate Analysis, Elsevier, vol. 105(1), pages 397-411.
    8. Lajmi Lakhal & Louis-Paul Rivest & Belkacem Abdous, 2008. "Estimating Survival and Association in a Semicompeting Risks Model," Biometrics, The International Biometric Society, vol. 64(1), pages 180-188, March.
    9. Ruosha Li & Limin Peng, 2015. "Quantile regression adjusting for dependent censoring from semicompeting risks," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 77(1), pages 107-130, January.
    10. Chen, Xiaolin & Zhang, Yahui & Chen, Xiaojing & Liu, Yi, 2019. "A simple model-free survival conditional feature screening," Statistics & Probability Letters, Elsevier, vol. 146(C), pages 156-160.
    11. Hyokyoung G. Hong & Xuerong Chen & David C. Christiani & Yi Li, 2018. "Integrated powered density: Screening ultrahigh dimensional covariates with survival outcomes," Biometrics, The International Biometric Society, vol. 74(2), pages 421-429, June.
    12. Jianqing Fan & Jinchi Lv, 2008. "Sure independence screening for ultrahigh dimensional feature space," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(5), pages 849-911, November.
    13. Runze Li & Wei Zhong & Liping Zhu, 2012. "Feature Screening via Distance Correlation Learning," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(499), pages 1129-1139, September.
    14. Laura J. van 't Veer & Hongyue Dai & Marc J. van de Vijver & Yudong D. He & Augustinus A. M. Hart & Mao Mao & Hans L. Peterse & Karin van der Kooy & Matthew J. Marton & Anke T. Witteveen & George J. S, 2002. "Gene expression profiling predicts clinical outcome of breast cancer," Nature, Nature, vol. 415(6871), pages 530-536, January.
    15. Limin Peng & Jason P. Fine, 2007. "Regression Modeling of Semicompeting Risks Data," Biometrics, The International Biometric Society, vol. 63(1), pages 96-108, March.
    16. Chen, Xiaolin & Chen, Xiaojing & Wang, Hong, 2018. "Robust feature screening for ultra-high dimensional right censored data via distance correlation," Computational Statistics & Data Analysis, Elsevier, vol. 119(C), pages 118-138.
    17. Yan, Xiaodong & Tang, Niansheng & Xie, Jinhan & Ding, Xianwen & Wang, Zhiqiang, 2018. "Fused mean–variance filter for feature screening," Computational Statistics & Data Analysis, Elsevier, vol. 122(C), pages 18-32.
    18. Zhixuan Fu & Shuangge Ma & Haiqun Lin & Chirag R. Parikh & Bingqing Zhou, 2017. "Penalized Variable Selection for Multi-center Competing Risks Data," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 9(2), pages 379-405, December.
    19. Xiaolin Chen & Yi Liu & Qihua Wang, 2019. "Joint feature screening for ultra-high-dimensional sparse additive hazards model by the sparsity-restricted pseudo-score estimator," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 71(5), pages 1007-1031, October.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Yang Qu & Yu Cheng, 2023. "Volume under the ROC surface for high-dimensional independent screening with ordinal competing risk outcomes," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 29(4), pages 735-751, October.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Zhong, Wei & Wang, Jiping & Chen, Xiaolin, 2021. "Censored mean variance sure independence screening for ultrahigh dimensional survival data," Computational Statistics & Data Analysis, Elsevier, vol. 159(C).
    2. Jing Zhang & Qihua Wang & Xuan Wang, 2022. "Surrogate-variable-based model-free feature screening for survival data under the general censoring mechanism," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 74(2), pages 379-397, April.
    3. Zhang, Shucong & Zhou, Yong, 2018. "Variable screening for ultrahigh dimensional heterogeneous data via conditional quantile correlations," Journal of Multivariate Analysis, Elsevier, vol. 165(C), pages 1-13.
    4. Chen, Xiaolin & Chen, Xiaojing & Wang, Hong, 2018. "Robust feature screening for ultra-high dimensional right censored data via distance correlation," Computational Statistics & Data Analysis, Elsevier, vol. 119(C), pages 118-138.
    5. Liming Wang & Xingxiang Li & Xiaoqing Wang & Peng Lai, 2022. "Unified mean-variance feature screening for ultrahigh-dimensional regression," Computational Statistics, Springer, vol. 37(4), pages 1887-1918, September.
    6. Tian, Bing & Liu, Zili & Wang, Hong, 2022. "Non-marginal feature screening for varying coefficient competing risks model," Statistics & Probability Letters, Elsevier, vol. 190(C).
    7. Xiaolin Chen & Catherine Chunling Liu & Sheng Xu, 2021. "An efficient algorithm for joint feature screening in ultrahigh-dimensional Cox’s model," Computational Statistics, Springer, vol. 36(2), pages 885-910, June.
    8. Qu, Lianqiang & Wang, Xiaoyu & Sun, Liuquan, 2022. "Variable screening for varying coefficient models with ultrahigh-dimensional survival data," Computational Statistics & Data Analysis, Elsevier, vol. 172(C).
    9. Zhang, Jing & Wang, Qihua & Kang, Jian, 2020. "Feature screening under missing indicator imputation with non-ignorable missing response," Computational Statistics & Data Analysis, Elsevier, vol. 149(C).
    10. Lai, Peng & Song, Fengli & Chen, Kaiwen & Liu, Zhi, 2017. "Model free feature screening with dependent variable in ultrahigh dimensional binary classification," Statistics & Probability Letters, Elsevier, vol. 125(C), pages 141-148.
    11. Grace Y. Yi & Wenqing He & Raymond. J. Carroll, 2022. "Feature screening with large‐scale and high‐dimensional survival data," Biometrics, The International Biometric Society, vol. 78(3), pages 894-907, September.
    12. Tang, Niansheng & Xia, Linli & Yan, Xiaodong, 2019. "Feature screening in ultrahigh-dimensional partially linear models with missing responses at random," Computational Statistics & Data Analysis, Elsevier, vol. 133(C), pages 208-227.
    13. Li, Xingxiang & Cheng, Guosheng & Wang, Liming & Lai, Peng & Song, Fengli, 2017. "Ultrahigh dimensional feature screening via projection," Computational Statistics & Data Analysis, Elsevier, vol. 114(C), pages 88-104.
    14. Yang, Guangren & Zhang, Ling & Li, Runze & Huang, Yuan, 2019. "Feature screening in ultrahigh-dimensional varying-coefficient Cox model," Journal of Multivariate Analysis, Elsevier, vol. 171(C), pages 284-297.
    15. Jing Zhang & Yanyan Liu & Hengjian Cui, 2021. "Model-free feature screening via distance correlation for ultrahigh dimensional survival data," Statistical Papers, Springer, vol. 62(6), pages 2711-2738, December.
    16. Jing Zhang & Haibo Zhou & Yanyan Liu & Jianwen Cai, 2021. "Feature screening for case‐cohort studies with failure time outcome," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 48(1), pages 349-370, March.
    17. Zhang, Shen & Zhao, Peixin & Li, Gaorong & Xu, Wangli, 2019. "Nonparametric independence screening for ultra-high dimensional generalized varying coefficient models with longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 171(C), pages 37-52.
    18. Li-Pang Chen, 2021. "Feature screening based on distance correlation for ultrahigh-dimensional censored data with covariate measurement error," Computational Statistics, Springer, vol. 36(2), pages 857-884, June.
    19. Lu, Jun & Lin, Lu & Wang, WenWu, 2021. "Partition-based feature screening for categorical data via RKHS embeddings," Computational Statistics & Data Analysis, Elsevier, vol. 157(C).
    20. Randall Reese & Guifang Fu & Geran Zhao & Xiaotian Dai & Xiaotian Li & Kenneth Chiu, 2022. "Epistasis Detection via the Joint Cumulant," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 14(3), pages 514-532, December.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:csdana:v:147:y:2020:i:c:s0167947320300335. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/csda .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.