IDEAS home Printed from https://ideas.repec.org/a/bla/biomet/v77y2021i4p1227-1240.html
   My bibliography  Save this article

Nonparametric matrix response regression with application to brain imaging data analysis

Author

Listed:
  • Wei Hu
  • Tianyu Pan
  • Dehan Kong
  • Weining Shen

Abstract

With the rapid growth of neuroimaging technologies, a great effort has been dedicated recently to investigate the dynamic changes in brain activity. Examples include time course calcium imaging and dynamic brain functional connectivity. In this paper, we propose a novel nonparametric matrix response regression model to characterize the nonlinear association between 2D image outcomes and predictors such as time and patient information. Our estimation procedure can be formulated as a nuclear norm regularization problem, which can capture the underlying low‐rank structure of the dynamic 2D images. We present a computationally efficient algorithm, derive the asymptotic theory, and show that the method outperforms other existing approaches in simulations. We then apply the proposed method to a calcium imaging study for estimating the change of fluorescent intensities of neurons, and an electroencephalography study for a comparison in the dynamic connectivity covariance matrices between alcoholic and control individuals. For both studies, the method leads to a substantial improvement in prediction error.

Suggested Citation

  • Wei Hu & Tianyu Pan & Dehan Kong & Weining Shen, 2021. "Nonparametric matrix response regression with application to brain imaging data analysis," Biometrics, The International Biometric Society, vol. 77(4), pages 1227-1240, December.
  • Handle: RePEc:bla:biomet:v:77:y:2021:i:4:p:1227-1240
    DOI: 10.1111/biom.13362
    as

    Download full text from publisher

    File URL: https://doi.org/10.1111/biom.13362
    Download Restriction: no

    File URL: https://libkey.io/10.1111/biom.13362?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Xiao Wang & Hongtu Zhu, 2017. "Generalized Scalar-on-Image Regression Models via Total Variation," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(519), pages 1156-1168, July.
    2. Lexin Li & Xin Zhang, 2017. "Parsimonious Tensor Response Regression," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(519), pages 1131-1146, July.
    3. Hua Zhou & Lexin Li, 2014. "Regularized matrix regression," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 76(2), pages 463-483, March.
    4. Jingfei Zhang & Jiguo Cao, 2017. "Finding Common Modules in a Time-Varying Network with Application to the Gene Regulation Network," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(519), pages 994-1008, July.
    5. Kun Chen & Hongbo Dong & Kung-Sik Chan, 2013. "Reduced rank regression via adaptive nuclear norm penalization," Biometrika, Biometrika Trust, vol. 100(4), pages 901-920.
    6. Shanshan Ding & R. Dennis Cook, 2018. "Matrix variate regressions and envelope models," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 80(2), pages 387-408, March.
    7. Eftychios A Pnevmatikakis & Keith Kelleher & Rebecca Chen & Petter Saggau & Krešimir Josić & Liam Paninski, 2012. "Fast Spatiotemporal Smoothing of Calcium Measurements in Dendritic Trees," PLOS Computational Biology, Public Library of Science, vol. 8(6), pages 1-17, June.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Luo, Chongliang & Liang, Jian & Li, Gen & Wang, Fei & Zhang, Changshui & Dey, Dipak K. & Chen, Kun, 2018. "Leveraging mixed and incomplete outcomes via reduced-rank modeling," Journal of Multivariate Analysis, Elsevier, vol. 167(C), pages 378-394.
    2. Xu Gao & Weining Shen & Liwen Zhang & Jianhua Hu & Norbert J. Fortin & Ron D. Frostig & Hernando Ombao, 2021. "Regularized matrix data clustering and its application to image analysis," Biometrics, The International Biometric Society, vol. 77(3), pages 890-902, September.
    3. Minji Lee & Zhihua Su, 2020. "A Review of Envelope Models," International Statistical Review, International Statistical Institute, vol. 88(3), pages 658-676, December.
    4. Yue Zhao & Ingrid Van Keilegom & Shanshan Ding, 2022. "Envelopes for censored quantile regression," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 49(4), pages 1562-1585, December.
    5. Federico Ferraccioli & Giovanna Menardi, 2023. "Modal clustering of matrix-variate data," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 17(2), pages 323-345, June.
    6. Yang, Yaohong & Zhao, Weihua & Wang, Lei, 2023. "Online regularized matrix regression with streaming data," Computational Statistics & Data Analysis, Elsevier, vol. 187(C).
    7. Yang, Yuehan & Xia, Siwei & Yang, Hu, 2023. "Multivariate sparse Laplacian shrinkage for joint estimation of two graphical structures," Computational Statistics & Data Analysis, Elsevier, vol. 178(C).
    8. Bo Wei & Limin Peng & Ying Guo & Amita Manatunga & Jennifer Stevens, 2023. "Tensor response quantile regression with neuroimaging data," Biometrics, The International Biometric Society, vol. 79(3), pages 1947-1958, September.
    9. Cui Guo & Jian Kang & Timothy D. Johnson, 2022. "A spatial Bayesian latent factor model for image‐on‐image regression," Biometrics, The International Biometric Society, vol. 78(1), pages 72-84, March.
    10. Chen, Canyi & Xu, Wangli & Zhu, Liping, 2022. "Distributed estimation in heterogeneous reduced rank regression: With application to order determination in sufficient dimension reduction," Journal of Multivariate Analysis, Elsevier, vol. 190(C).
    11. S. Yaser Samadi & Wiranthe B. Herath, 2023. "Reduced-rank Envelope Vector Autoregressive Models," Papers 2309.12902, arXiv.org.
    12. Hung Hung & Su‐Yun Huang, 2019. "Sufficient dimension reduction via random‐partitions for the large‐p‐small‐n problem," Biometrics, The International Biometric Society, vol. 75(1), pages 245-255, March.
    13. Feng, Sanying & Lian, Heng & Zhu, Fukang, 2016. "Reduced rank regression with possibly non-smooth criterion functions: An empirical likelihood approach," Computational Statistics & Data Analysis, Elsevier, vol. 103(C), pages 139-150.
    14. Kai Deng & Xin Zhang, 2022. "Tensor envelope mixture model for simultaneous clustering and multiway dimension reduction," Biometrics, The International Biometric Society, vol. 78(3), pages 1067-1079, September.
    15. Lan Liu & Wei Li & Zhihua Su & Dennis Cook & Luca Vizioli & Essa Yacoub, 2022. "Efficient estimation via envelope chain in magnetic resonance imaging‐based studies," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 49(2), pages 481-501, June.
    16. Mishra, Aditya & Dey, Dipak K. & Chen, Yong & Chen, Kun, 2021. "Generalized co-sparse factor regression," Computational Statistics & Data Analysis, Elsevier, vol. 157(C).
    17. Pan Shang & Lingchen Kong, 2021. "Regularization Parameter Selection for the Low Rank Matrix Recovery," Journal of Optimization Theory and Applications, Springer, vol. 189(3), pages 772-792, June.
    18. Giuseppe Brandi & T. Di Matteo, 2020. "A new multilayer network construction via Tensor learning," Papers 2004.05367, arXiv.org.
    19. Daniel Spencer & Rajarshi Guhaniyogi & Raquel Prado, 2020. "Joint Bayesian Estimation of Voxel Activation and Inter-regional Connectivity in fMRI Experiments," Psychometrika, Springer;The Psychometric Society, vol. 85(4), pages 845-869, December.
    20. Wang, Lei & Zhang, Jing & Li, Bo & Liu, Xiaohui, 2022. "Quantile trace regression via nuclear norm regularization," Statistics & Probability Letters, Elsevier, vol. 182(C).

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bla:biomet:v:77:y:2021:i:4:p:1227-1240. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Wiley Content Delivery (email available below). General contact details of provider: http://www.blackwellpublishing.com/journal.asp?ref=0006-341X .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.