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Trophic models of aquatic ecosystems

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  1. Libralato, Simone & Solidoro, Cosimo, 2009. "Bridging biogeochemical and food web models for an End-to-End representation of marine ecosystem dynamics: The Venice lagoon case study," Ecological Modelling, Elsevier, vol. 220(21), pages 2960-2971.
  2. Milessi, Andrés C. & Danilo, Calliari & Laura, Rodríguez-Graña & Daniel, Conde & Javier, Sellanes & Rodríguez-Gallego, Lorena, 2010. "Trophic mass-balance model of a subtropical coastal lagoon, including a comparison with a stable isotope analysis of the food-web," Ecological Modelling, Elsevier, vol. 221(24), pages 2859-2869.
  3. Nuttall, M.A. & Jordaan, A. & Cerrato, R.M. & Frisk, M.G., 2011. "Identifying 120 years of decline in ecosystem structure and maturity of Great South Bay, New York using the Ecopath modelling approach," Ecological Modelling, Elsevier, vol. 222(18), pages 3335-3345.
  4. Antony, P.J. & Dhanya, S. & Lyla, P.S. & Kurup, B.M. & Ajmal Khan, S., 2010. "Ecological role of stomatopods (mantis shrimps) and potential impacts of trawling in a marine ecosystem of the southeast coast of India," Ecological Modelling, Elsevier, vol. 221(21), pages 2604-2614.
  5. Vassallo, P. & Paoli, C. & Buonocore, E. & Franzese, P.P. & Russo, G.F. & Povero, P., 2017. "Assessing the value of natural capital in marine protected areas: A biophysical and trophodynamic environmental accounting model," Ecological Modelling, Elsevier, vol. 355(C), pages 12-17.
  6. Chiara Paoli & Paolo Povero & Ilaria Rigo & Giulia Dapueto & Rachele Bordoni & Paolo Vassallo, 2022. "Two Sides of the Same Coin: A Theoretical Framework for Strong Sustainability in Marine Protected Areas," Sustainability, MDPI, vol. 14(10), pages 1-20, May.
  7. De La Fuente, G. & Asnaghi, V. & Chiantore, M. & Thrush, S. & Povero, P. & Vassallo, P. & Petrillo, M. & Paoli, C., 2019. "The effect of Cystoseira canopy on the value of midlittoral habitats in NW Mediterranean, an emergy assessment," Ecological Modelling, Elsevier, vol. 404(C), pages 1-11.
  8. Kolding, J. & van Zwieten, P., 2006. "Improving productivity in tropical lakes and reservoirs," Monographs, The WorldFish Center, number 37509, April.
  9. Moreau, J. & Palomares, M.L.D. & Torres, F.S.B., Jr. & Pauly, D., 1995. "Atlas demographique des populations de poissons d'eau douce d'Afrique," Monographs, The WorldFish Center, number 10441, April.
  10. Ullah, Md. Hadayet & Rashed-Un-Nabi, Md. & Al-Mamun, Md. Abdulla, 2012. "Trophic model of the coastal ecosystem of the Bay of Bengal using mass balance Ecopath model," Ecological Modelling, Elsevier, vol. 225(C), pages 82-94.
  11. Angelini, R. & Agostinho, A.A., 2005. "Parameter estimates for fishes of the upper Paranß river floodplain and Itaipu reservoir (Brazil)," Naga, The WorldFish Center, vol. 28(1/2), pages 53-57.
  12. Jia, Peiqiao & Hu, Menghong & Hu, Zhongjun & Liu, Qigen & Wu, Zhen, 2012. "Modeling trophic structure and energy flows in a typical macrophyte dominated shallow lake using the mass balanced model," Ecological Modelling, Elsevier, vol. 233(C), pages 26-30.
  13. Booth, Shawn & Walters, William J & Steenbeek, Jeroen & Christensen, Villy & Charmasson, Sabine, 2020. "An Ecopath with Ecosim model for the Pacific coast of eastern Japan: Describing the marine environment and its fisheries prior to the Great East Japan earthquake," Ecological Modelling, Elsevier, vol. 428(C).
  14. Jørgensen, S.E. & Nors Nielsen, Søren, 2007. "Application of exergy as thermodynamic indicator in ecology," Energy, Elsevier, vol. 32(5), pages 673-685.
  15. Zetina-Rejón, Manuel J. & Cabrera-Neri, Erika & López-Ibarra, Gladis A. & Arcos-Huitrón, N. Enrique & Christensen, Villy, 2015. "Trophic modeling of the continental shelf ecosystem outside of Tabasco, Mexico: A network and modularity analysis," Ecological Modelling, Elsevier, vol. 313(C), pages 314-324.
  16. Darwall, William R.T. & Allison, Edward H. & Turner, George F. & Irvine, Kenneth, 2010. "Lake of flies, or lake of fish? A trophic model of Lake Malawi," Ecological Modelling, Elsevier, vol. 221(4), pages 713-727.
  17. Cornejo-Donoso, Jorge & Antezana, Tarsicio, 2008. "Preliminary trophic model of the Antarctic Peninsula Ecosystem (Sub-area CCAMLR 48.1)," Ecological Modelling, Elsevier, vol. 218(1), pages 1-17.
  18. Tsehaye, Iyob & Nagelkerke, Leopold A.J., 2008. "Exploring optimal fishing scenarios for the multispecies artisanal fisheries of Eritrea using a trophic model," Ecological Modelling, Elsevier, vol. 212(3), pages 319-333.
  19. Díaz López, Bruno & Bunke, Mandy & Bernal Shirai, Julia Andrea, 2008. "Marine aquaculture off Sardinia Island (Italy): Ecosystem effects evaluated through a trophic mass-balance model," Ecological Modelling, Elsevier, vol. 212(3), pages 292-303.
  20. Perryman, Holly A. & Tarnecki, Joseph H. & Grüss, Arnaud & Babcock, Elizabeth A. & Sagarese, Skyler R. & Ainsworth, Cameron H. & Gray DiLeone, Alisha M., 2020. "A revised diet matrix to improve the parameterization of a West Florida Shelf Ecopath model for understanding harmful algal bloom impacts," Ecological Modelling, Elsevier, vol. 416(C).
  21. Rochette, S. & Lobry, J. & Lepage, M. & Boët, Ph., 2009. "Dealing with uncertainty in qualitative models with a semi-quantitative approach based on simulations. Application to the Gironde estuarine food web (France)," Ecological Modelling, Elsevier, vol. 220(2), pages 122-132.
  22. Han, Jeong-Ho & Kumar, Hema K. & Lee, Jae Hoon & Zhang, Chang-Ik & Kim, Se-Wha & Lee, Jung-Ho & Kim, Sang Don & An, Kwang-Guk, 2011. "Integrative trophic network assessments of a lentic ecosystem by key ecological approaches of water chemistry, trophic guilds, and ecosystem health assessments along with an ECOPATH model," Ecological Modelling, Elsevier, vol. 222(19), pages 3457-3472.
  23. Yang Yuan & Jie Feng & Weiwei Xian & Hui Zhang, 2022. "Analysis of the Ecosystem Characteristics and Ecological Carrying Capacity of the Main Commercial Fish in the Artificial Reef Ecosystem in Laizhou Bay Using the Ecopath Model," Sustainability, MDPI, vol. 14(21), pages 1-18, October.
  24. Christensen, Villy & de la Puente, Santiago & Sueiro, Juan Carlos & Steenbeek, Jeroen & Majluf, Patricia, 2014. "Valuing seafood: The Peruvian fisheries sector," Marine Policy, Elsevier, vol. 44(C), pages 302-311.
  25. Angelini, Ronaldo & de Morais, Ronny José & Catella, Agostinho Carlos & Resende, Emiko Kawakami & Libralato, Simone, 2013. "Aquatic food webs of the oxbow lakes in the Pantanal: A new site for fisheries guaranteed by alternated control?," Ecological Modelling, Elsevier, vol. 253(C), pages 82-96.
  26. Katherine Velghe & Irene Gregory-Eaves, 2013. "Body Size Is a Significant Predictor of Congruency in Species Richness Patterns: A Meta-Analysis of Aquatic Studies," PLOS ONE, Public Library of Science, vol. 8(2), pages 1-6, February.
  27. Salcido-Guevara, Luis A. & Arreguín-Sánchez, Francisco, 2014. "Effects of biomass changes in the supply–demand balance of energy in aquatic food webs," Ecological Modelling, Elsevier, vol. 276(C), pages 64-79.
  28. Prado, Patricia & Ibáñez, Carles & Caiola, Nuno & Reyes, Enrique, 2013. "Evaluation of seasonal variability in the food-web properties of coastal lagoons subjected to contrasting salinity gradients using network analyses," Ecological Modelling, Elsevier, vol. 265(C), pages 180-193.
  29. Moreau, J. & Palomares, M.L.D. & Torres, F.S.B. & Pauly, Daniel, 1995. "Atlas demographique des populations de poissons d'eau douce d'Afrique," Technical Reports 44838, Worldfish Center.
  30. Rakshit, Nabyendu & Banerjee, Arnab & Mukherjee, Joyita & Chakrabarty, Moitreyee & Borrett, Stuart R. & Ray, Santanu, 2017. "Comparative study of food webs from two different time periods of Hooghly Matla estuarine system, India through network analysis," Ecological Modelling, Elsevier, vol. 356(C), pages 25-37.
  31. Steenbeek, Jeroen & Buszowski, Joe & Christensen, Villy & Akoglu, Ekin & Aydin, Kerim & Ellis, Nick & Felinto, Dalai & Guitton, Jerome & Lucey, Sean & Kearney, Kelly & Mackinson, Steven & Pan, Mike & , 2016. "Ecopath with Ecosim as a model-building toolbox: Source code capabilities, extensions, and variations," Ecological Modelling, Elsevier, vol. 319(C), pages 178-189.
  32. Fetahi, Tadesse & Schagerl, Michael & Mengistou, Seyoum & Libralato, Simone, 2011. "Food web structure and trophic interactions of the tropical highland lake Hayq, Ethiopia," Ecological Modelling, Elsevier, vol. 222(3), pages 804-813.
  33. Chea, Ratha & Guo, Chuanbo & Grenouillet, Gaël & Lek, Sovan, 2016. "Toward an ecological understanding of a flood-pulse system lake in a tropical ecosystem: Food web structure and ecosystem health," Ecological Modelling, Elsevier, vol. 323(C), pages 1-11.
  34. Watson, Reg A. & Nowara, Gabrielle B. & Tracey, Sean R. & Fulton, Elizabeth A. & Bulman, Cathy M. & Edgar, Graham J. & Barrett, Neville S. & Lyle, Jeremy M. & Frusher, Stewart D. & Buxton, Colin D., 2013. "Ecosystem model of Tasmanian waters explores impacts of climate-change induced changes in primary productivity," Ecological Modelling, Elsevier, vol. 264(C), pages 115-129.
  35. Dalsgaard, J. P. T. & Oficial, R. T., 1997. "A quantitative approach for assessing the productive performance and ecological contributions of smallholder farms," Agricultural Systems, Elsevier, vol. 55(4), pages 503-533, December.
  36. Ofir, E. & Gal, G. & Goren, M. & Shapiro, J. & Spanier, E., 2016. "Detecting changes to the functioning of a lake ecosystem following a regime shift based on static food-web models," Ecological Modelling, Elsevier, vol. 320(C), pages 145-157.
  37. Tesfaye, Gashaw & Wolff, Matthias, 2018. "Modeling trophic interactions and the impact of an introduced exotic carp species in the Rift Valley Lake Koka, Ethiopia," Ecological Modelling, Elsevier, vol. 378(C), pages 26-36.
  38. Ortiz, Marco & Berrios, Fernando & Campos, Leonardo & Uribe, Roberto & Ramirez, Alejandro & Hermosillo-Núñez, Brenda & González, Jorge & Rodriguez-Zaragoza, Fabián, 2015. "Mass balanced trophic models and short-term dynamical simulations for benthic ecological systems of Mejillones and Antofagasta bays (SE Pacific): Comparative network structure and assessment of human ," Ecological Modelling, Elsevier, vol. 309, pages 153-162.
  39. Heymans, Johanna Jacomina & Coll, Marta & Link, Jason S. & Mackinson, Steven & Steenbeek, Jeroen & Walters, Carl & Christensen, Villy, 2016. "Best practice in Ecopath with Ecosim food-web models for ecosystem-based management," Ecological Modelling, Elsevier, vol. 331(C), pages 173-184.
  40. Byron, Carrie & Link, Jason & Costa-Pierce, Barry & Bengtson, David, 2011. "Calculating ecological carrying capacity of shellfish aquaculture using mass-balance modeling: Narragansett Bay, Rhode Island," Ecological Modelling, Elsevier, vol. 222(10), pages 1743-1755.
  41. Jiang, Hong & Cheng, He-Qin & Xu, Hai-Gen & Arreguín-Sánchez, Francisco & Zetina-Rejón, Manuel J. & Del Monte Luna, Pablo & Le Quesne, William J.F., 2008. "Trophic controls of jellyfish blooms and links with fisheries in the East China Sea," Ecological Modelling, Elsevier, vol. 212(3), pages 492-503.
  42. Franzese, Pier Paolo & Buonocore, Elvira & Donnarumma, Luigia & Russo, Giovanni F., 2017. "Natural capital accounting in marine protected areas: The case of the Islands of Ventotene and S. Stefano (Central Italy)," Ecological Modelling, Elsevier, vol. 360(C), pages 290-299.
  43. Coll, Marta & Palomera, Isabel & Tudela, Sergi, 2009. "Decadal changes in a NW Mediterranean Sea food web in relation to fishing exploitation," Ecological Modelling, Elsevier, vol. 220(17), pages 2088-2102.
  44. Fetahi, Tadesse & Mengistou, Seyoum, 2007. "Trophic analysis of Lake Awassa (Ethiopia) using mass-balance Ecopath model," Ecological Modelling, Elsevier, vol. 201(3), pages 398-408.
  45. Paoli, C. & Povero, P. & Burgos, E. & Dapueto, G. & Fanciulli, G. & Massa, F. & Scarpellini, P. & Vassallo, P., 2018. "Natural capital and environmental flows assessment in marine protected areas: The case study of Liguria region (NW Mediterranean Sea)," Ecological Modelling, Elsevier, vol. 368(C), pages 121-135.
  46. Fourriére, Manon & Alvarado, Juan José & Cortés, Jorge & Taylor, Marc H. & Ayala-Bocos, Arturo & Azofeifa-Solano, Juan Carlos & Arauz, Randall & Heidemeyer, Maike & López-Garro, Andrés & Zanella, Ilen, 2019. "Energy flow structure and role of keystone groups in shallow water environments in Isla del Coco, Costa Rica, Eastern Tropical Pacific," Ecological Modelling, Elsevier, vol. 396(C), pages 74-85.
  47. Torres, María Ángeles & Coll, Marta & Heymans, Johanna Jacomina & Christensen, Villy & Sobrino, Ignacio, 2013. "Food-web structure of and fishing impacts on the Gulf of Cadiz ecosystem (South-western Spain)," Ecological Modelling, Elsevier, vol. 265(C), pages 26-44.
  48. Colléter, Mathieu & Valls, Audrey & Guitton, Jérôme & Gascuel, Didier & Pauly, Daniel & Christensen, Villy, 2015. "Global overview of the applications of the Ecopath with Ecosim modeling approach using the EcoBase models repository," Ecological Modelling, Elsevier, vol. 302(C), pages 42-53.
  49. Villanueva, Maria Concepcion S. & Isumbisho, Mwapu & Kaningini, Boniface & Moreau, Jacques & Micha, Jean-Claude, 2008. "Modeling trophic interactions in Lake Kivu: What roles do exotics play?," Ecological Modelling, Elsevier, vol. 212(3), pages 422-438.
  50. Surya Rathore & Manish Chandola & Rupan Raghuvanshi & Manmeet Kaur & Kundan Veer Singh, 2021. "Indigenous Pest Management Practices of Indian Hill Farmers: Introspecting Their Rationale and Communication Pattern for Secure Ecosystems," Sustainability, MDPI, vol. 13(21), pages 1-17, October.
  51. Sabrina Al Ismaili & Sachinandan Dutta, 2023. "Ecosystem Characteristics and Trophic Model of the Artificial Reef Ecosystem in the Sea of Oman, Sultanate of Oman," Sustainability, MDPI, vol. 15(24), pages 1-27, December.
  52. Rosas-Luis, R. & Salinas-Zavala, C.A. & Koch, V. & Luna, P. Del Monte & Morales-Zárate, M.V., 2008. "Importance of jumbo squid Dosidicus gigas (Orbigny, 1835) in the pelagic ecosystem of the central Gulf of California," Ecological Modelling, Elsevier, vol. 218(1), pages 149-161.
  53. Banerjee, Arnab & Scharler, Ursula M. & Fath, Brian D. & Ray, Santanu, 2017. "Temporal variation of keystone species and their impact on system performance in a South African estuarine ecosystem," Ecological Modelling, Elsevier, vol. 363(C), pages 207-220.
  54. Natugonza, Vianny & Ogutu-Ohwayo, Richard & Musinguzi, Laban & Kashindye, Benedicto & Jónsson, Steingrímur & Valtysson, Hreidar Thor, 2016. "Exploring the structural and functional properties of the Lake Victoria food web, and the role of fisheries, using a mass balance model," Ecological Modelling, Elsevier, vol. 342(C), pages 161-174.
  55. Ortiz, Marco & Campos, Leonardo & Berrios, Fernando & Rodriguez, Fabián & Hermosillo, Brenda & González, Jorge, 2013. "Network properties and keystoneness assessment in different intertidal communities dominated by two ecosystem engineer species (SE Pacific coast): A comparative analysis," Ecological Modelling, Elsevier, vol. 250(C), pages 307-318.
  56. Jørgensen, Sven Erik, 2007. "Description of aquatic ecosystem's development by eco-exergy and exergy destruction," Ecological Modelling, Elsevier, vol. 204(1), pages 22-28.
  57. Pauly, D. & Martosubroto, P. (eds.), 1996. "Baseline studies of biodiversity: the fish resources of Western Indonesia," Monographs, The WorldFish Center, number 10988, April.
  58. Panikkar, Preetha & Khan, M. Feroz, 2008. "Comparative mass-balanced trophic models to assess the impact of environmental management measures in a tropical reservoir ecosystem," Ecological Modelling, Elsevier, vol. 212(3), pages 280-291.
  59. Xu, Shannan & Chen, Zuozhi & Li, Chunhou & Huang, Xiaoping & Li, Shiyu, 2011. "Assessing the carrying capacity of tilapia in an intertidal mangrove-based polyculture system of Pearl River Delta, China," Ecological Modelling, Elsevier, vol. 222(3), pages 846-856.
  60. Morales-Zárate, M.V. & Lluch-Cota, S.E. & Serviere-Zaragoza, E. & del Próo, S. Guzmán, 2011. "Modeling an exploited rocky coastal ecosystem: Bahia Tortugas, Mexico," Ecological Modelling, Elsevier, vol. 222(5), pages 1185-1191.
  61. Couce-Montero, Lorena & Christensen, Villy & Castro, José J., 2015. "Effects of small-scale and recreational fisheries on the Gran Canaria ecosystem," Ecological Modelling, Elsevier, vol. 312(C), pages 61-76.
  62. Hossain, Md. Monir & Matsuishi, Takashi & Arhonditsis, George, 2010. "Elucidation of ecosystem attributes of an oligotrophic lake in Hokkaido, Japan, using Ecopath with Ecosim (EwE)," Ecological Modelling, Elsevier, vol. 221(13), pages 1717-1730.
  63. Duan, L.J. & Li, S.Y. & Liu, Y. & Moreau, J. & Christensen, V., 2009. "Modeling changes in the coastal ecosystem of the Pearl River Estuary from 1981 to 1998," Ecological Modelling, Elsevier, vol. 220(20), pages 2802-2818.
  64. Dalsgaard, J.P.T. & Oficial, R.T., 1998. "Modeling and analyzing the agroecological performance of farms with ECOPATH," Monographs, The WorldFish Center, number 13080, April.
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