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Facilitating Parameter Estimation and Sensitivity Analysis of Agent-Based Models: A Cookbook Using NetLogo and 'R'

Citations

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Cited by:

  1. Halsey, Samniqueka J. & Miller, James R., 2018. "A spatial agent-based model of the disease vector Ixodes scapularis to explore host-tick associations," Ecological Modelling, Elsevier, vol. 387(C), pages 96-106.
  2. Marius Kaffai & Raphael H Heiberger, 2021. "Modeling non-pharmaceutical interventions in the COVID-19 pandemic with survey-based simulations," PLOS ONE, Public Library of Science, vol. 16(10), pages 1-19, October.
  3. Yoak, Andrew J. & Reece, John F. & Gehrt, Stanley D. & Hamilton, Ian M., 2016. "Optimizing free-roaming dog control programs using agent-based models," Ecological Modelling, Elsevier, vol. 341(C), pages 53-61.
  4. Lamperti, Francesco & Roventini, Andrea & Sani, Amir, 2018. "Agent-based model calibration using machine learning surrogates," Journal of Economic Dynamics and Control, Elsevier, vol. 90(C), pages 366-389.
  5. Emanuele Borgonovo & Marco Pangallo & Jan Rivkin & Leonardo Rizzo & Nicolaj Siggelkow, 2022. "Sensitivity analysis of agent-based models: a new protocol," Computational and Mathematical Organization Theory, Springer, vol. 28(1), pages 52-94, March.
  6. Wozniak, Marcin, 2016. "Job placement agencies in an artificial labor market," Economics - The Open-Access, Open-Assessment E-Journal (2007-2020), Kiel Institute for the World Economy (IfW Kiel), vol. 10, pages 1-54.
  7. repec:hal:spmain:info:hdl:2441/13thfd12aa8rmplfudlgvgahff is not listed on IDEAS
  8. Planque, Benjamin & Aarflot, Johanna M. & Buttay, Lucie & Carroll, JoLynn & Fransner, Filippa & Hansen, Cecilie & Husson, Bérengère & Langangen, Øystein & Lindstrøm, Ulf & Pedersen, Torstein & Primice, 2022. "A standard protocol for describing the evaluation of ecological models," Ecological Modelling, Elsevier, vol. 471(C).
  9. John J Nay & Yevgeniy Vorobeychik, 2016. "Predicting Human Cooperation," PLOS ONE, Public Library of Science, vol. 11(5), pages 1-19, May.
  10. Priscilla Avegliano & Jaime Simão Sichman, 2023. "Equation-Based Versus Agent-Based Models: Why Not Embrace Both for an Efficient Parameter Calibration?," Journal of Artificial Societies and Social Simulation, Journal of Artificial Societies and Social Simulation, vol. 26(4), pages 1-3.
  11. Medeiros-Sousa, Antônio Ralph & Laporta, Gabriel Zorello & Mucci, Luis Filipe & Marrelli, Mauro Toledo, 2022. "Epizootic dynamics of yellow fever in forest fragments: An agent-based model to explore the influence of vector and host parameters," Ecological Modelling, Elsevier, vol. 466(C).
  12. Grant, Tyler J. & Parry, Hazel R. & Zalucki, Myron P. & Bradbury, Steven P., 2018. "Predicting monarch butterfly (Danaus plexippus) movement and egg-laying with a spatially-explicit agent-based model: The role of monarch perceptual range and spatial memory," Ecological Modelling, Elsevier, vol. 374(C), pages 37-50.
  13. Thomas, Spencer A. & Lloyd, David J.B. & Skeldon, Anne C., 2016. "Equation-free analysis of agent-based models and systematic parameter determination," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 464(C), pages 27-53.
  14. Ștefan Ionescu & Ionuț Nica & Nora Chiriță, 2021. "Cybernetics Approach Using Agent-Based Modeling in the Process of Evacuating Educational Institutions in Case of Disasters," Sustainability, MDPI, vol. 13(18), pages 1-29, September.
  15. Grimm, Volker & Berger, Uta, 2016. "Structural realism, emergence, and predictions in next-generation ecological modelling: Synthesis from a special issue," Ecological Modelling, Elsevier, vol. 326(C), pages 177-187.
  16. John J. Nay & Yevgeniy Vorobeychik, 2016. "Predicting Human Cooperation," Papers 1601.07792, arXiv.org, revised Apr 2016.
  17. repec:hal:spmain:info:hdl:2441/20hflp7eqn97boh50no50tv67n is not listed on IDEAS
  18. Gawith, David & Hodge, Ian & Morgan, Fraser & Daigneault, Adam, 2020. "Climate change costs more than we think because people adapt less than we assume," Ecological Economics, Elsevier, vol. 173(C).
  19. Christopher J Lynch & Saikou Y Diallo & Hamdi Kavak & Jose J Padilla, 2020. "A content analysis-based approach to explore simulation verification and identify its current challenges," PLOS ONE, Public Library of Science, vol. 15(5), pages 1-33, May.
  20. Dominik Husarek & Vjekoslav Salapic & Simon Paulus & Michael Metzger & Stefan Niessen, 2021. "Modeling the Impact of Electric Vehicle Charging Infrastructure on Regional Energy Systems: Fields of Action for an Improved e-Mobility Integration," Energies, MDPI, vol. 14(23), pages 1-27, November.
  21. Dick, D.D.C. & Ayllón, D., 2017. "FloMan-MF: Floodplain Management for the Moor Frog − a simulation model for amphibian conservation in dynamic wetlands," Ecological Modelling, Elsevier, vol. 348(C), pages 110-124.
  22. Lamperti, Francesco & Roventini, Andrea & Sani, Amir, 2018. "Agent-based model calibration using machine learning surrogates," Journal of Economic Dynamics and Control, Elsevier, vol. 90(C), pages 366-389.
  23. Lisa Huber & Nico Bahro & Georg Leitinger & Ulrike Tappeiner & Ulrich Strasser, 2019. "Agent-Based Modelling of a Coupled Water Demand and Supply System at the Catchment Scale," Sustainability, MDPI, vol. 11(21), pages 1-15, November.
  24. Ayllón, Daniel & Railsback, Steven F. & Vincenzi, Simone & Groeneveld, Jürgen & Almodóvar, Ana & Grimm, Volker, 2016. "InSTREAM-Gen: Modelling eco-evolutionary dynamics of trout populations under anthropogenic environmental change," Ecological Modelling, Elsevier, vol. 326(C), pages 36-53.
  25. Giorgio Fagiolo & Mattia Guerini & Francesco Lamperti & Alessio Moneta & Andrea Roventini, 2017. "Validation of Agent-Based Models in Economics and Finance," LEM Papers Series 2017/23, Laboratory of Economics and Management (LEM), Sant'Anna School of Advanced Studies, Pisa, Italy.
  26. Lapp, Maya & Long, Colby, 2022. "A new approach to agent-based models of Community Resource Management based on the analysis of cheating, monitoring, and sanctioning," Ecological Modelling, Elsevier, vol. 468(C).
  27. Chudzińska, Magda & Ayllón, Daniel & Madsen, Jesper & Nabe-Nielsen, Jacob, 2016. "Discriminating between possible foraging decisions using pattern-oriented modelling: The case of pink-footed geese in Mid-Norway during their spring migration," Ecological Modelling, Elsevier, vol. 320(C), pages 299-315.
  28. Lorscheid, Iris & Meyer, Matthias, 2016. "Divide and conquer: Configuring submodels for valid and efficient analyses of complex simulation models," Ecological Modelling, Elsevier, vol. 326(C), pages 152-161.
  29. Onggo, Bhakti Stephan & Karatas, Mumtaz, 2016. "Test-driven simulation modelling: A case study using agent-based maritime search-operation simulation," European Journal of Operational Research, Elsevier, vol. 254(2), pages 517-531.
  30. Grimm, Volker & Berger, Uta, 2016. "Robustness analysis: Deconstructing computational models for ecological theory and applications," Ecological Modelling, Elsevier, vol. 326(C), pages 162-167.
  31. Robert Huber & Hang Xiong & Kevin Keller & Robert Finger, 2022. "Bridging behavioural factors and standard bio‐economic modelling in an agent‐based modelling framework," Journal of Agricultural Economics, Wiley Blackwell, vol. 73(1), pages 35-63, February.
  32. Chakaphon Singto & Martijn Vries & Gert Jan Hofstede & Luuk Fleskens, 2021. "Ex Ante Impact Assessment of Reservoir Construction Projects for Different Stakeholders Using Agent-Based Modeling," Water Resources Management: An International Journal, Published for the European Water Resources Association (EWRA), Springer;European Water Resources Association (EWRA), vol. 35(3), pages 1047-1064, February.
  33. Chudzinska, Magda & Dupont, Yoko L. & Nabe-Nielsen, Jacob & Maia, Kate P. & Henriksen, Marie V. & Rasmussen, Claus & Kissling, W. Daniel & Hagen, Melanie & Trøjelsgaard, Kristian, 2020. "Combining the strengths of agent-based modelling and network statistics to understand animal movement and interactions with resources: example from within-patch foraging decisions of bumblebees," Ecological Modelling, Elsevier, vol. 430(C).
  34. Brinkmann, Katja & Kübler, Daniel & Liehr, Stefan & Buerkert, Andreas, 2021. "Agent-based modelling of the social-ecological nature of poverty traps in southwestern Madagascar," Agricultural Systems, Elsevier, vol. 190(C).
  35. Fust, Pascal & Schlecht, Eva, 2018. "Integrating spatio-temporal variation in resource availability and herbivore movements into rangeland management: RaMDry—An agent-based model on livestock feeding ecology in a dynamic, heterogeneous, ," Ecological Modelling, Elsevier, vol. 369(C), pages 13-41.
  36. van der Vaart, Elske & Beaumont, Mark A. & Johnston, Alice S.A. & Sibly, Richard M., 2015. "Calibration and evaluation of individual-based models using Approximate Bayesian Computation," Ecological Modelling, Elsevier, vol. 312(C), pages 182-190.
  37. Alexandra I. Klimenko & Diana A. Vorobeva & Sergey A. Lashin, 2023. "A New Visualization and Analysis Method for a Convolved Representation of Mass Computational Experiments with Biological Models," Mathematics, MDPI, vol. 11(12), pages 1-19, June.
  38. Tardy, Olivia & Massé, Ariane & Pelletier, Fanie & Fortin, Daniel, 2018. "Interplay between contact risk, conspecific density, and landscape connectivity: An individual-based modeling framework," Ecological Modelling, Elsevier, vol. 373(C), pages 25-38.
  39. Lee, Ju-Sung & Filatova, Tatiana & Ligmann-Zielinska, Arika & Hassani-Mahmooei, Behrooz & Stonedahl, Forrest & Lorscheid, Iris & Voinov, Alexey & Polhill, J. Gareth & Sun, Zhanli & Parker, Dawn C., 2015. "The complexities of agent-based modeling output analysis," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 18(4).
  40. Schasfoort, Joeri & Stockermans, Christopher, 2017. "Fundamentals unknown: Momentum, mean-reversion and price-to-earnings trading in an artificial stock market," Economics Discussion Papers 2017-63, Kiel Institute for the World Economy (IfW Kiel).
  41. André Grow & Jan Van Bavel, 2015. "Assortative Mating and the Reversal of Gender Inequality in Education in Europe: An Agent-Based Model," PLOS ONE, Public Library of Science, vol. 10(6), pages 1-24, June.
  42. van der Vaart, Elske & Johnston, Alice S.A. & Sibly, Richard M., 2016. "Predicting how many animals will be where: How to build, calibrate and evaluate individual-based models," Ecological Modelling, Elsevier, vol. 326(C), pages 113-123.
  43. Pearce, Phoebe & Slade, Raphael, 2018. "Feed-in tariffs for solar microgeneration: Policy evaluation and capacity projections using a realistic agent-based model," Energy Policy, Elsevier, vol. 116(C), pages 95-111.
  44. Fouladvand, Javanshir & Aranguren Rojas, Maria & Hoppe, Thomas & Ghorbani, Amineh, 2022. "Simulating thermal energy community formation: Institutional enablers outplaying technological choice," Applied Energy, Elsevier, vol. 306(PA).
  45. Evans, Luke C. & Sibly, Richard M. & Thorbek, Pernille & Sims, Ian & Oliver, Tom H. & Walters, Richard J., 2019. "Quantifying the effectiveness of agri-environment schemes for a grassland butterfly using individual-based models," Ecological Modelling, Elsevier, vol. 411(C).
  46. Neil, Emily & Madsen, Jens Koed & Carrella, Ernesto & Payette, Nicolas & Bailey, Richard, 2020. "Agent-based modelling as a tool for elephant poaching mitigation," Ecological Modelling, Elsevier, vol. 427(C).
  47. Huber, Robert & Späti, Karin & Finger, Robert, 2023. "A behavioural agent-based modelling approach for the ex-ante assessment of policies supporting precision agriculture," Ecological Economics, Elsevier, vol. 212(C).
  48. Boeing, Geoff, 2018. "The Effects of Inequality, Density, and Heterogeneous Residential Preferences on Urban Displacement and Metropolitan Structure: An Agent-Based Model," SocArXiv mkq7d, Center for Open Science.
  49. Troost, Christian & Huber, Robert & Bell, Andrew R. & van Delden, Hedwig & Filatova, Tatiana & Le, Quang Bao & Lippe, Melvin & Niamir, Leila & Polhill, J. Gareth & Sun, Zhanli & Berger, Thomas, 2023. "How to keep it adequate: A protocol for ensuring validity in agent-based simulation," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 159, pages 1-21.
  50. de Jager, Monique & Hengeveld, Geerten M. & Mooij, Wolf M. & Slooten, Elisabeth, 2019. "Modelling the spatial dynamics of Maui dolphins using individual-based models," Ecological Modelling, Elsevier, vol. 402(C), pages 59-65.
  51. Stenglein, Jennifer L. & Gilbert, Jonathan H. & Wydeven, Adrian P. & Van Deelen, Timothy R., 2015. "An individual-based model for southern Lake Superior wolves: A tool to explore the effect of human-caused mortality on a landscape of risk," Ecological Modelling, Elsevier, vol. 302(C), pages 13-24.
  52. Wozniak, Marcin, 2016. "Job placement agencies in an agent-based model of the local labor market with the long-term unemployed and on-the-job flows," Economics Discussion Papers 2016-24, Kiel Institute for the World Economy (IfW Kiel).
  53. Drechsler, Martin & Wätzold, Frank & Grimm, Volker, 2022. "The hitchhiker's guide to generic ecological-economic modelling of land-use-based biodiversity conservation policies," Ecological Modelling, Elsevier, vol. 465(C).
  54. Tang, Yi & Liu, Mingyu & Sun, Zhanli, 2020. "Indirect effects of grazing on wind-dispersed elm seeds in sparse woodlands of Northern China," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 9(12).
  55. Adrien Querbes, 2018. "Banned from the sharing economy: an agent-based model of a peer-to-peer marketplace for consumer goods and services," Journal of Evolutionary Economics, Springer, vol. 28(3), pages 633-665, August.
  56. Kathrin Eismann, 2021. "Diffusion and persistence of false rumors in social media networks: implications of searchability on rumor self-correction on Twitter," Journal of Business Economics, Springer, vol. 91(9), pages 1299-1329, November.
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