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On model-based clustering of skewed matrix data

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  • Melnykov, Volodymyr
  • Zhu, Xuwen

Abstract

The existing finite mixture modeling and model-based clustering literature focuses primarily on the analysis of multivariate data observed in the form of vectors, with each element representing a specific feature. In this setting, multivariate Gaussian mixture models have been the most commonly used. Due to severe modeling issues observed when normal components cannot provide adequate fit to groups, much attention has been paid to developing models capable of accounting for skewness in data. In our work, we target the problem of mixture modeling with components that can handle skewness in matrix-valued data. The proposed developments open a wide range of possible modeling capabilities, with numerous applications, as illustrated in this paper. A novel matrix mixture model is proposed. Its skewness parameters enjoy appealing interpretability. The corresponding estimation procedure and various ways of parameterization are discussed. Comprehensive simulation studies and applications to real-life datasets illustrate the efficiency of the proposed developments, supported by good results.

Suggested Citation

  • Melnykov, Volodymyr & Zhu, Xuwen, 2018. "On model-based clustering of skewed matrix data," Journal of Multivariate Analysis, Elsevier, vol. 167(C), pages 181-194.
  • Handle: RePEc:eee:jmvana:v:167:y:2018:i:c:p:181-194
    DOI: 10.1016/j.jmva.2018.04.007
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    1. Kiefer, Nicholas M, 1978. "Discrete Parameter Variation: Efficient Estimation of a Switching Regression Model," Econometrica, Econometric Society, vol. 46(2), pages 427-434, March.
    2. Zhu, Xuwen & Melnykov, Volodymyr, 2018. "Manly transformation in finite mixture modeling," Computational Statistics & Data Analysis, Elsevier, vol. 121(C), pages 190-208.
    3. Sharon Lee & Geoffrey McLachlan, 2013. "Rejoinder to the discussion of “Model-based clustering and classification with non-normal mixture distributions”," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 22(4), pages 473-479, November.
    4. Charles Lindsey & Simon Sheather, 2010. "Power transformation via multivariate Box–Cox," Stata Journal, StataCorp LP, vol. 10(1), pages 69-81, March.
    5. Sharon Lee & Geoffrey McLachlan, 2013. "Model-based clustering and classification with non-normal mixture distributions," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 22(4), pages 427-454, November.
    6. Boldea, Otilia & Magnus, Jan R., 2009. "Maximum Likelihood Estimation of the Multivariate Normal Mixture Model," Journal of the American Statistical Association, American Statistical Association, vol. 104(488), pages 1539-1549.
    7. Lawrence Hubert & Phipps Arabie, 1985. "Comparing partitions," Journal of Classification, Springer;The Classification Society, vol. 2(1), pages 193-218, December.
    8. Biernacki, Christophe & Celeux, Gilles & Govaert, Gerard, 2003. "Choosing starting values for the EM algorithm for getting the highest likelihood in multivariate Gaussian mixture models," Computational Statistics & Data Analysis, Elsevier, vol. 41(3-4), pages 561-575, January.
    9. Cabral, Celso Rômulo Barbosa & Lachos, Víctor Hugo & Prates, Marcos O., 2012. "Multivariate mixture modeling using skew-normal independent distributions," Computational Statistics & Data Analysis, Elsevier, vol. 56(1), pages 126-142, January.
    10. O’Hagan, Adrian & Murphy, Thomas Brendan & Gormley, Isobel Claire & McNicholas, Paul D. & Karlis, Dimitris, 2016. "Clustering with the multivariate normal inverse Gaussian distribution," Computational Statistics & Data Analysis, Elsevier, vol. 93(C), pages 18-30.
    11. Sharon Lee & Geoffrey McLachlan, 2013. "On mixtures of skew normal and skew $$t$$ -distributions," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 7(3), pages 241-266, September.
    12. Melnykov, Volodymyr, 2016. "Model-based biclustering of clickstream data," Computational Statistics & Data Analysis, Elsevier, vol. 93(C), pages 31-45.
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    8. Michael P. B. Gallaugher & Paul D. McNicholas, 2020. "Mixtures of skewed matrix variate bilinear factor analyzers," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 14(2), pages 415-434, June.
    9. Punzo, Antonio & Bagnato, Luca, 2021. "Modeling the cryptocurrency return distribution via Laplace scale mixtures," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 563(C).
    10. Sharon M. McNicholas & Paul D. McNicholas & Daniel A. Ashlock, 2021. "An Evolutionary Algorithm with Crossover and Mutation for Model-Based Clustering," Journal of Classification, Springer;The Classification Society, vol. 38(2), pages 264-279, July.
    11. Kozubowski, Tomasz J. & Mazur, Stepan & Podgorski, Krysztof, 2022. "Matrix Variate Generalized Laplace Distributions," Working Papers 2022:7, Örebro University, School of Business.

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