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Sensitivity and uncertainty analysis of the APSIM-wheat model: Interactions between cultivar, environmental, and management parameters

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  • Zhao, Gang
  • Bryan, Brett A.
  • Song, Xiaodong

Abstract

Process-based crop models use many cultivar parameters to simulate crop growth. Usually, these parameters cannot be directly measured and need to be calibrated when the crop model is applied to a new environment or a new cultivar. Determining the relative importance of the cultivar parameters to the specific outputs could streamline the calibration of crop models for new cultivars. Sensitivity analysis can quantify the influence of model input parameters on model outputs. We applied the variance-based global sensitivity analysis to the wheat module of the Agricultural Production Systems sIMulator (APSIM) for the first time and calculated the sensitivity of four outputs including yield, biomass, flowering day, and maturity day to ten cultivar parameters including both the main and total effects sensitivity indices. We explored the effects of changing climate, soil, and management practices on parameter sensitivity by analyzing two fertilization rates (0 and 100kgNha−1), across five sites in Australia's cereal-growing regions. Uncertainties for the four outputs with varying cultivar parameters, climate–soil conditions and management practices were evaluated. We found that yield was most sensitive to the cultivar parameters that determine the yield component (grains per gram stem, max grain size, and potential grain filling rate) and the phenology parameters that determine length of the reproductive stages (thermal time from floral initiation to flowing and thermal time from start grain filling to maturity). All ten cultivar parameters affected biomass, amongst which the parameters of vernalization sensitivity and thermal time from floral initiation to flowering were the most influential. Fertilization influenced the rank order of parameter sensitivities more strongly than climate–soil conditions for yield and biomass outputs. Under 0kgNha−1, with the variation of cultivar parameters simulated yield varied from 64 to 3559kgha−1 (minimum and maximum), biomass from 693 to 12,864kgha−1. Fertilization of 100kgNha−1 increased the maximum yield to 9157kgha−1 and biomass to 22,057kgha−1. We conclude that to minimize cultivar-related uncertainty, cultivar parameters should be carefully calibrated when applying the APSIM-wheat model to a new cultivar in a new environment. By targeting the most influential phenological parameters for calibration first and then the yield component parameters, the calibration of APSIM can be streamlined.

Suggested Citation

  • Zhao, Gang & Bryan, Brett A. & Song, Xiaodong, 2014. "Sensitivity and uncertainty analysis of the APSIM-wheat model: Interactions between cultivar, environmental, and management parameters," Ecological Modelling, Elsevier, vol. 279(C), pages 1-11.
  • Handle: RePEc:eee:ecomod:v:279:y:2014:i:c:p:1-11
    DOI: 10.1016/j.ecolmodel.2014.02.003
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    1. DeJonge, Kendall C. & Ascough, James C. & Ahmadi, Mehdi & Andales, Allan A. & Arabi, Mazdak, 2012. "Global sensitivity and uncertainty analysis of a dynamic agroecosystem model under different irrigation treatments," Ecological Modelling, Elsevier, vol. 231(C), pages 113-125.
    2. Roman-Paoli, E. & Welch, S. M. & Vanderlip, R. L., 2000. "Comparing genetic coefficient estimation methods using the CERES-Maize model," Agricultural Systems, Elsevier, vol. 65(1), pages 29-41, July.
    3. Dzotsi, K.A. & Basso, B. & Jones, J.W., 2013. "Development, uncertainty and sensitivity analysis of the simple SALUS crop model in DSSAT," Ecological Modelling, Elsevier, vol. 260(C), pages 62-76.
    4. Saltelli, Andrea & Ratto, Marco & Tarantola, Stefano & Campolongo, Francesca, 2006. "Sensitivity analysis practices: Strategies for model-based inference," Reliability Engineering and System Safety, Elsevier, vol. 91(10), pages 1109-1125.
    5. Song, Xiaodong & Bryan, Brett A. & Paul, Keryn I. & Zhao, Gang, 2012. "Variance-based sensitivity analysis of a forest growth model," Ecological Modelling, Elsevier, vol. 247(C), pages 135-143.
    6. Keating, B. A. & Meinke, H., 1998. "Assessing exceptional drought with a cropping systems simulator: a case study for grain production in northeast Australia," Agricultural Systems, Elsevier, vol. 57(3), pages 315-332, July.
    7. Wang, Fugui & Mladenoff, David J. & Forrester, Jodi A. & Keough, Cindy & Parton, William J., 2013. "Global sensitivity analysis of a modified CENTURY model for simulating impacts of harvesting fine woody biomass for bioenergy," Ecological Modelling, Elsevier, vol. 259(C), pages 16-23.
    8. Aggarwal, P. K., 1995. "Uncertainties in crop, soil and weather inputs used in growth models: Implications for simulated outputs and their applications," Agricultural Systems, Elsevier, vol. 48(3), pages 361-384.
    9. Xiong, Wei & Holman, Ian & Conway, Declan & Lin, Erda & Li, Yue, 2008. "A crop model cross calibration for use in regional climate impacts studies," Ecological Modelling, Elsevier, vol. 213(3), pages 365-380.
    10. Makowski, David & Naud, Cédric & Jeuffroy, Marie-Hélène & Barbottin, Aude & Monod, Hervé, 2006. "Global sensitivity analysis for calculating the contribution of genetic parameters to the variance of crop model prediction," Reliability Engineering and System Safety, Elsevier, vol. 91(10), pages 1142-1147.
    11. Song, Xiaodong & Bryan, Brett A. & Almeida, Auro C. & Paul, Keryn I. & Zhao, Gang & Ren, Yin, 2013. "Time-dependent sensitivity of a process-based ecological model," Ecological Modelling, Elsevier, vol. 265(C), pages 114-123.
    12. McCown, R. L. & Hammer, G. L. & Hargreaves, J. N. G. & Holzworth, D. P. & Freebairn, D. M., 1996. "APSIM: a novel software system for model development, model testing and simulation in agricultural systems research," Agricultural Systems, Elsevier, vol. 50(3), pages 255-271.
    13. Chen, Chao & Wang, Enli & Yu, Qiang, 2010. "Modelling the effects of climate variability and water management on crop water productivity and water balance in the North China Plain," Agricultural Water Management, Elsevier, vol. 97(8), pages 1175-1184, August.
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