IDEAS home Printed from https://ideas.repec.org/a/bla/biomet/v78y2022i4p1427-1440.html
   My bibliography  Save this article

Multivariate Bayesian clustering using covariate‐informed components with application to boreal vegetation sensitivity

Author

Listed:
  • Henry R. Scharf
  • Ann M. Raiho
  • Sierra Pugh
  • Carl A. Roland
  • David K. Swanson
  • Sarah E. Stehn
  • Mevin B. Hooten

Abstract

Climate change is impacting both the distribution and abundance of vegetation, especially in far northern latitudes. The effects of climate change are different for every plant assemblage and vary heterogeneously in both space and time. Small changes in climate could result in large vegetation responses in sensitive assemblages but weak responses in robust assemblages. But, patterns and mechanisms of sensitivity and robustness are not yet well understood, largely due to a lack of long‐term measurements of climate and vegetation. Fortunately, observations are sometimes available across a broad spatial extent. We develop a novel statistical model for a multivariate response based on unknown cluster‐specific effects and covariances, where cluster labels correspond to sensitivity and robustness. Our approach utilizes a prototype model for cluster membership that offers flexibility while enforcing smoothness in cluster probabilities across sites with similar characteristics. We demonstrate our approach with an application to vegetation abundance in Alaska, USA, in which we leverage the broad spatial extent of the study area as a proxy for unrecorded historical observations. In the context of the application, our approach yields interpretable site‐level cluster labels associated with assemblage‐level sensitivity and robustness without requiring strong a priori assumptions about the drivers of climate sensitivity.

Suggested Citation

  • Henry R. Scharf & Ann M. Raiho & Sierra Pugh & Carl A. Roland & David K. Swanson & Sarah E. Stehn & Mevin B. Hooten, 2022. "Multivariate Bayesian clustering using covariate‐informed components with application to boreal vegetation sensitivity," Biometrics, The International Biometric Society, vol. 78(4), pages 1427-1440, December.
  • Handle: RePEc:bla:biomet:v:78:y:2022:i:4:p:1427-1440
    DOI: 10.1111/biom.13507
    as

    Download full text from publisher

    File URL: https://doi.org/10.1111/biom.13507
    Download Restriction: no

    File URL: https://libkey.io/10.1111/biom.13507?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Devin S. Johnson & Elizabeth H. Sinclair, 2017. "Modeling joint abundance of multiple species using Dirichlet process mixtures," Environmetrics, John Wiley & Sons, Ltd., vol. 28(3), May.
    2. Alistair W. R. Seddon & Marc Macias-Fauria & Peter R. Long & David Benz & Kathy J. Willis, 2016. "Sensitivity of global terrestrial ecosystems to climate variability," Nature, Nature, vol. 531(7593), pages 229-232, March.
    3. Scott R. Loarie & Philip B. Duffy & Healy Hamilton & Gregory P. Asner & Christopher B. Field & David D. Ackerly, 2009. "The velocity of climate change," Nature, Nature, vol. 462(7276), pages 1052-1055, December.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Xinyi Lu & Mevin B. Hooten & Ann M. Raiho & David K. Swanson & Carl A. Roland & Sarah E. Stehn, 2023. "Latent trajectory models for spatio‐temporal dynamics in Alaskan ecosystems," Biometrics, The International Biometric Society, vol. 79(4), pages 3664-3675, December.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Mouhamadou Bamba Sylla & Nellie Elguindi & Filippo Giorgi & Dominik Wisser, 2016. "Projected robust shift of climate zones over West Africa in response to anthropogenic climate change for the late 21st century," Climatic Change, Springer, vol. 134(1), pages 241-253, January.
    2. Mouhamadou Sylla & Nellie Elguindi & Filippo Giorgi & Dominik Wisser, 2016. "Projected robust shift of climate zones over West Africa in response to anthropogenic climate change for the late 21st century," Climatic Change, Springer, vol. 134(1), pages 241-253, January.
    3. Meng Luo & Shengwei Zhang & Lei Huang & Zhiqiang Liu & Lin Yang & Ruishen Li & Xi Lin, 2022. "Temporal and Spatial Changes of Ecological Environment Quality Based on RSEI: A Case Study in Ulan Mulun River Basin, China," Sustainability, MDPI, vol. 14(20), pages 1-19, October.
    4. Meineri, Eric & Dahlberg, C. Johan & Hylander, Kristoffer, 2015. "Using Gaussian Bayesian Networks to disentangle direct and indirect associations between landscape physiography, environmental variables and species distribution," Ecological Modelling, Elsevier, vol. 313(C), pages 127-136.
    5. Sharaniya Vijitharan & Nophea Sasaki & Manjunatha Venkatappa & Nitin Kumar Tripathi & Issei Abe & Takuji W. Tsusaka, 2022. "Assessment of Forest Cover Changes in Vavuniya District, Sri Lanka: Implications for the Establishment of Subnational Forest Reference Emission Level," Land, MDPI, vol. 11(7), pages 1-25, July.
    6. Michael A. Wulder & Jeffrey A. Cardille & Joanne C. White & Bronwyn Rayfield, 2018. "Context and Opportunities for Expanding Protected Areas in Canada," Land, MDPI, vol. 7(4), pages 1-21, November.
    7. Bruno R Ribeiro & Lilian P Sales & Paulo De Marco Jr. & Rafael Loyola, 2016. "Assessing Mammal Exposure to Climate Change in the Brazilian Amazon," PLOS ONE, Public Library of Science, vol. 11(11), pages 1-13, November.
    8. Shulin Chen & Zhenghao Zhu & Xiaotong Liu & Li Yang, 2022. "Variation in Vegetation and Its Driving Force in the Pearl River Delta Region of China," IJERPH, MDPI, vol. 19(16), pages 1-15, August.
    9. Alexander Correa-Metrio & Mark Bush & Socorro Lozano-García & Susana Sosa-Nájera, 2013. "Millennial-Scale Temperature Change Velocity in the Continental Northern Neotropics," PLOS ONE, Public Library of Science, vol. 8(12), pages 1-1, December.
    10. Huang, Ze & Liu, Yu & Qiu, Kaiyang & López-Vicente, Manuel & Shen, Weibo & Wu, Gao-Lin, 2021. "Soil-water deficit in deep soil layers results from the planted forest in a semi-arid sandy land: Implications for sustainable agroforestry water management," Agricultural Water Management, Elsevier, vol. 254(C).
    11. Leslie A. Jones & Clint C. Muhlfeld & Lucy A. Marshall, 2017. "Projected warming portends seasonal shifts of stream temperatures in the Crown of the Continent Ecosystem, USA and Canada," Climatic Change, Springer, vol. 144(4), pages 641-655, October.
    12. Erickson, Adam & Nitschke, Craig & Coops, Nicholas & Cumming, Steven & Stenhouse, Gordon, 2015. "Past-century decline in forest regeneration potential across a latitudinal and elevational gradient in Canada," Ecological Modelling, Elsevier, vol. 313(C), pages 94-102.
    13. Tomas O. Höök & Carolyn J. Foley & Paris Collingsworth & Leslie Dorworth & Brant Fisher & Jason T. Hoverman & Elizabeth LaRue & Mark Pyron & Jennifer Tank, 2020. "An assessment of the potential impacts of climate change on freshwater habitats and biota of Indiana, USA," Climatic Change, Springer, vol. 163(4), pages 1897-1916, December.
    14. Yuhao Jin & Han Zhang & Yuchao Yan & Peitong Cong, 2020. "A Semi-Parametric Geographically Weighted Regression Approach to Exploring Driving Factors of Fractional Vegetation Cover: A Case Study of Guangdong," Sustainability, MDPI, vol. 12(18), pages 1-19, September.
    15. Marcin Zarek & Marta Kempf, 2023. "Distribution of genetic variability in mature and progeny populations of Abies alba Mill. from the Polish Western and Eastern Carpathians," Journal of Forest Science, Czech Academy of Agricultural Sciences, vol. 69(4), pages 144-157.
    16. Koko Warner & Zinta Zommers & Anita Wreford & Margot Hurlbert & David Viner & Jill Scantlan & Kenna Halsey & Kevin Halsey & Chet Tamang, 2019. "Characteristics of Transformational Adaptation in Climate-Land-Society Interactions," Sustainability, MDPI, vol. 11(2), pages 1-22, January.
    17. Disha Sachan & Pankaj Kumar & Md. Saquib Saharwardi, 2022. "Contemporary climate change velocity for near-surface temperatures over India," Climatic Change, Springer, vol. 173(3), pages 1-19, August.
    18. Cecilia Parracciani & Robert Buitenwerf & Jens-Christian Svenning, 2023. "Impacts of Climate Change on Vegetation in Kenya: Future Projections and Implications for Protected Areas," Land, MDPI, vol. 12(11), pages 1-20, November.
    19. Hasibuan, Abdul Muis & Gregg, Daniel & Stringer, Randy, 2020. "Accounting for diverse risk attitudes in measures of risk perceptions: A case study of climate change risk for small-scale citrus farmers in Indonesia," Land Use Policy, Elsevier, vol. 95(C).
    20. Shuang Liu & Xuefei Li & Long Chen & Qing Zhao & Chaohui Zhao & Xisheng Hu & Jian Li, 2022. "A New Approach to Investigate the Spatially Heterogeneous in the Cooling Effects of Landscape Pattern," Land, MDPI, vol. 11(2), pages 1-21, February.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bla:biomet:v:78:y:2022:i:4:p:1427-1440. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Wiley Content Delivery (email available below). General contact details of provider: http://www.blackwellpublishing.com/journal.asp?ref=0006-341X .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.