Clique-detection models in computational biochemistry and genomics

Citations

Cited by:

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6. Foad Mahdavi Pajouh, 2020. "Minimum cost edge blocker clique problem," Annals of Operations Research, Springer, vol. 294(1), pages 345-376, November.
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8. Zhuqi Miao & Balabhaskar Balasundaram & Eduardo L. Pasiliao, 2014. "An exact algorithm for the maximum probabilistic clique problem," Journal of Combinatorial Optimization, Springer, vol. 28(1), pages 105-120, July.
9. Almeida, Maria Teresa & Carvalho, Filipa D., 2014. "An analytical comparison of the LP relaxations of integer models for the k-club problem," European Journal of Operational Research, Elsevier, vol. 232(3), pages 489-498.
10. Matsypura, Dmytro & Veremyev, Alexander & Pasiliao, Eduardo L. & Prokopyev, Oleg A., 2023. "Finding the most degree-central walks and paths in a graph: Exact and heuristic approaches," European Journal of Operational Research, Elsevier, vol. 308(3), pages 1021-1036.
11. Alexander Veremyev & Oleg A. Prokopyev & Sergiy Butenko & Eduardo L. Pasiliao, 2016. "Exact MIP-based approaches for finding maximum quasi-cliques and dense subgraphs," Computational Optimization and Applications, Springer, vol. 64(1), pages 177-214, May.
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15. Stefano Coniglio & Stefano Gualandi, 2022. "Optimizing over the Closure of Rank Inequalities with a Small Right-Hand Side for the Maximum Stable Set Problem via Bilevel Programming," INFORMS Journal on Computing, INFORMS, vol. 34(2), pages 1006-1023, March.
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17. Veremyev, Alexander & Boginski, Vladimir & Pasiliao, Eduardo L. & Prokopyev, Oleg A., 2022. "On integer programming models for the maximum 2-club problem and its robust generalizations in sparse graphs," European Journal of Operational Research, Elsevier, vol. 297(1), pages 86-101.
18. Benjamin McClosky & Illya V. Hicks, 2012. "Combinatorial algorithms for the maximum k-plex problem," Journal of Combinatorial Optimization, Springer, vol. 23(1), pages 29-49, January.
19. Benjamin McClosky & Anthony Simms & Illya V. Hicks, 2011. "Co-2-plex polynomials," Journal of Combinatorial Optimization, Springer, vol. 22(4), pages 640-650, November.
20. San Segundo, Pablo & Coniglio, Stefano & Furini, Fabio & Ljubić, Ivana, 2019. "A new branch-and-bound algorithm for the maximum edge-weighted clique problem," European Journal of Operational Research, Elsevier, vol. 278(1), pages 76-90.
21. Zhou, Qing & Benlic, Una & Wu, Qinghua, 2020. "An opposition-based memetic algorithm for the maximum quasi-clique problem," European Journal of Operational Research, Elsevier, vol. 286(1), pages 63-83.
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25. Oleksandra Yezerska & Sergiy Butenko & Vladimir L. Boginski, 2018. "Detecting robust cliques in graphs subject to uncertain edge failures," Annals of Operations Research, Springer, vol. 262(1), pages 109-132, March.
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