IDEAS home Printed from https://ideas.repec.org/p/hal/journl/hal-04707549.html
   My bibliography  Save this paper

F-BIAS: Towards a distributed national core facility for Bioimage Analysis

Author

Listed:
  • Mélodie Ambroset

    (BioCore [Nantes] - INSERM - Institut National de la Santé et de la Recherche Médicale - CNRS - Centre National de la Recherche Scientifique - CHU Nantes - Centre Hospitalier Universitaire de Nantes = Nantes University Hospital - Nantes Univ - Nantes Université)

  • Anselmet Marie
  • Benedetti Clément
  • Meslin Arthur
  • Maillot Aurélien
  • Rouvière Christian
  • Maucort Guillaume
  • Breuilly Marine

    (Santé Lyon Est - Louis Léopold Ollier - UCBL - Université Claude Bernard Lyon 1 - Université de Lyon - INSERM - Institut National de la Santé et de la Recherche Médicale - CNRS - Centre National de la Recherche Scientifique)

  • Albert Marvin
  • Letort Gaëlle

    (Département de Biologie du Développement et Cellules souches - Department of Developmental and Stem Cell Biology - IP - Institut Pasteur [Paris] - UPCité - Université Paris Cité)

  • Trullo Antonio
  • Bäcker Volker
  • Mutterer Jérôme
  • Cordelières Fabrice

    (BIC - Bordeaux Imaging Center - UB - Université de Bordeaux - Institut François Magendie - INSERM - Institut National de la Santé et de la Recherche Médicale - CNRS - Centre National de la Recherche Scientifique)

  • Pécot Thierry
  • Phan Minh-Son

    (IAH - Hub d'analyse d'images - Image Analysis Hub (Platform) - IP - Institut Pasteur [Paris] - UPCité - Université Paris Cité)

  • Rigaud Stéphane

    (IAH - Hub d'analyse d'images - Image Analysis Hub (Platform) - IP - Institut Pasteur [Paris] - UPCité - Université Paris Cité)

  • Feyeux Magali
  • Paul-Gilloteaux Perrine

    (BioCore [Nantes] - INSERM - Institut National de la Santé et de la Recherche Médicale - CNRS - Centre National de la Recherche Scientifique - CHU Nantes - Centre Hospitalier Universitaire de Nantes = Nantes University Hospital - Nantes Univ - Nantes Université)

  • Macé Anne-Sophie
  • Tinevez Jean-Yves

    (IAH - Hub d'analyse d'images - Image Analysis Hub (Platform) - IP - Institut Pasteur [Paris] - UPCité - Université Paris Cité, IP - Institut Pasteur [Paris])

Abstract

We discuss in this article the creation and organization of a national core facility for bioimage analysis, based on a distributed team. F-BIAS federates bioimage analysts across France and relies on them to deliver services to the researchers of this territory. The main challenge in implementing this structure is to provide significant scientific value to its members, thereby encouraging their active participation and persuading their respective host teams to support their involvement. F-BIAS accomplished this by creating a professional network that mitigates the negative effects of isolation experienced by its members, who are often the sole bioimage analyst within their local teams, and fosters the development of their technical skills. In a second phase we capitalized on F-BIAS to create a virtual, remotely-operating core facility for bioimage analysis, offering consultations and collaborative project services to the scientific community of France. The services are organized so that they also contribute to the technical proficiency of the analysts. To promote the creation of similar structures, we present and discuss here the organization of this nationally distributed bioimage analysis service core, highlighting successes and challenges.

Suggested Citation

  • Mélodie Ambroset & Anselmet Marie & Benedetti Clément & Meslin Arthur & Maillot Aurélien & Rouvière Christian & Maucort Guillaume & Breuilly Marine & Albert Marvin & Letort Gaëlle & Trullo Antonio & B, 2025. "F-BIAS: Towards a distributed national core facility for Bioimage Analysis," Post-Print hal-04707549, HAL.
  • Handle: RePEc:hal:journl:hal-04707549
    DOI: 10.48550/arXiv.2409.15009
    as

    Download full text from publisher

    To our knowledge, this item is not available for download. To find whether it is available, there are three options:
    1. Check below whether another version of this item is available online.
    2. Check on the provider's web page whether it is in fact available.
    3. Perform a search for a similarly titled item that would be available.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:hal:journl:hal-04707549. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: CCSD (email available below). General contact details of provider: https://hal.archives-ouvertes.fr/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.