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Taking into Account Groups of Sites

In: Multivariate Analysis of Ecological Data with ade4

Author

Listed:
  • Jean Thioulouse

    (CNRS UMR 5558 – Université de Lyon, Laboratoire de Biométrie et Biologie Evolutive)

  • Stéphane Dray

    (CNRS UMR 5558 – Université de Lyon, Laboratoire de Biométrie et Biologie Evolutive)

  • Anne-Béatrice Dufour

    (CNRS UMR 5558 – Université de Lyon, Laboratoire de Biométrie et Biologie Evolutive)

  • Aurélie Siberchicot

    (CNRS UMR 5558 – Université de Lyon, Laboratoire de Biométrie et Biologie Evolutive)

  • Thibaut Jombart

    (London School of Hygiene and Tropical Medicine, Department of Infectious Disease Epidemiology)

  • Sandrine Pavoine

    (Muséum national déHistoire naturelle, CNRS, Sorbonne Université, Centre d’Ecologie et des Sciences de la Conservation (CESCO))

Abstract

This chapter shows how the partitioning of sites can be taken into account during the analysis of an ecological data table. We present the Between-Class and Within-Class Analyses and Discriminant Analysis. Then we present several examples of use of these methods on a small data set with simple structures. The chapter ends with a comparison between Discriminant Analysis and Between-Class Analysis.

Suggested Citation

  • Jean Thioulouse & Stéphane Dray & Anne-Béatrice Dufour & Aurélie Siberchicot & Thibaut Jombart & Sandrine Pavoine, 2018. "Taking into Account Groups of Sites," Springer Books, in: Multivariate Analysis of Ecological Data with ade4, chapter 0, pages 119-140, Springer.
    • Handle: RePEc:spr:sprchp:978-1-4939-8850-1_7
    DOI: 10.1007/978-1-4939-8850-1_7
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