IDEAS home Printed from https://ideas.repec.org/a/spr/drugsa/v39y2016i1d10.1007_s40264-015-0352-2.html
   My bibliography  Save this article

Feasibility of Prioritizing Drug–Drug-Event Associations Found in Electronic Health Records

Author

Listed:
  • Juan M. Banda

    (Stanford Center for Biomedical Informatics Research)

  • Alison Callahan

    (Stanford Center for Biomedical Informatics Research)

  • Rainer Winnenburg

    (Stanford Center for Biomedical Informatics Research)

  • Howard R. Strasberg

    (Wolters Kluwer Health)

  • Aurel Cami

    (Boston Children’s Hospital
    Harvard Medical School)

  • Ben Y. Reis

    (Boston Children’s Hospital
    Harvard Medical School)

  • Santiago Vilar

    (Columbia University Medical Center)

  • George Hripcsak

    (Columbia University Medical Center)

  • Michel Dumontier

    (Stanford Center for Biomedical Informatics Research)

  • Nigam Haresh Shah

    (Stanford Center for Biomedical Informatics Research)

Abstract

Background and Objective Several studies have demonstrated the ability to detect adverse events potentially related to multiple drug exposure via data mining. However, the number of putative associations produced by such computational approaches is typically large, making experimental validation difficult. We theorized that those potential associations for which there is evidence from multiple complementary sources are more likely to be true, and explored this idea using a published database of drug–drug-adverse event associations derived from electronic health records (EHRs). Methods We prioritized drug–drug-event associations derived from EHRs using four sources of information: (1) public databases, (2) sources of spontaneous reports, (3) literature, and (4) non-EHR drug–drug interaction (DDI) prediction methods. After pre-filtering the associations by removing those found in public databases, we devised a ranking for associations based on the support from the remaining sources, and evaluated the results of this rank-based prioritization. Results We collected information for 5983 putative EHR-derived drug–drug-event associations involving 345 drugs and ten adverse events from four data sources and four prediction methods. Only seven drug–drug-event associations (

Suggested Citation

  • Juan M. Banda & Alison Callahan & Rainer Winnenburg & Howard R. Strasberg & Aurel Cami & Ben Y. Reis & Santiago Vilar & George Hripcsak & Michel Dumontier & Nigam Haresh Shah, 2016. "Feasibility of Prioritizing Drug–Drug-Event Associations Found in Electronic Health Records," Drug Safety, Springer, vol. 39(1), pages 45-57, January.
  • Handle: RePEc:spr:drugsa:v:39:y:2016:i:1:d:10.1007_s40264-015-0352-2
    DOI: 10.1007/s40264-015-0352-2
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s40264-015-0352-2
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s40264-015-0352-2?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Yiqing Zhao & Yue Yu & Hanyin Wang & Yikuan Li & Yu Deng & Guoqian Jiang & Yuan Luo, 2022. "Machine Learning in Causal Inference: Application in Pharmacovigilance," Drug Safety, Springer, vol. 45(5), pages 459-476, May.
    2. Yuan Luo & William K. Thompson & Timothy M. Herr & Zexian Zeng & Mark A. Berendsen & Siddhartha R. Jonnalagadda & Matthew B. Carson & Justin Starren, 2017. "Natural Language Processing for EHR-Based Pharmacovigilance: A Structured Review," Drug Safety, Springer, vol. 40(11), pages 1075-1089, November.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:drugsa:v:39:y:2016:i:1:d:10.1007_s40264-015-0352-2. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com/economics/journal/40264 .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.