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An effective and efficient hierarchical K-means clustering algorithm

Author

Listed:
  • Jianpeng Qi
  • Yanwei Yu
  • Lihong Wang
  • Jinglei Liu
  • Yingjie Wang

Abstract

K -means plays an important role in different fields of data mining. However, k -means often becomes sensitive due to its random seeds selecting. Motivated by this, this article proposes an optimized k -means clustering method, named k* -means, along with three optimization principles. First, we propose a hierarchical optimization principle initialized by k * seeds ( k * > k ) to reduce the risk of random seeds selecting, and then use the proposed “top- n nearest clusters merging†to merge the nearest clusters in each round until the number of clusters reaches at k . Second, we propose an “optimized update principle†that leverages moved points updating incrementally instead of recalculating mean and SSE of cluster in k -means iteration to minimize computation cost. Third, we propose a strategy named “cluster pruning strategy†to improve efficiency of k -means. This strategy omits the farther clusters to shrink the adjustable space in each iteration. Experiments performed on real UCI and synthetic datasets verify the efficiency and effectiveness of our proposed algorithm.

Suggested Citation

  • Jianpeng Qi & Yanwei Yu & Lihong Wang & Jinglei Liu & Yingjie Wang, 2017. "An effective and efficient hierarchical K-means clustering algorithm," International Journal of Distributed Sensor Networks, , vol. 13(8), pages 15501477177, August.
  • Handle: RePEc:sae:intdis:v:13:y:2017:i:8:p:1550147717728627
    DOI: 10.1177/1550147717728627
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    References listed on IDEAS

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    1. Yanwei Yu & Jindong Zhao & Xiaodong Wang & Qin Wang & Yonggang Zhang, 2015. "Cludoop: An Efficient Distributed Density-Based Clustering for Big Data Using Hadoop," International Journal of Distributed Sensor Networks, , vol. 11(6), pages 579391-5793, June.
    2. Zhipeng Cai & Maysam Heydari & Guohui Lin, 2005. "Clustering Binary Oligonucleotide Fingerprint Vectors for DNA Clone Classification Analysis," Journal of Combinatorial Optimization, Springer, vol. 9(2), pages 199-211, March.
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