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Fast machine learning image reconstruction of radially undersampled k-space data for low-latency real-time MRI

Author

Listed:
  • Johanna Topalis
  • Jakob Dexl
  • Katharina Jeblick
  • Rabea Klaar
  • Christopher Kurz
  • Timo Löhr
  • Andreas Mittermeier
  • Balthasar Schachtner
  • Anna Theresa Stüber
  • Tobias Weber
  • Philipp Wesp
  • Jens Ricke
  • Max Seidensticker
  • Guillaume Landry
  • Michael Ingrisch
  • Olaf Dietrich

Abstract

Fast data acquisition and fast image reconstruction are essential to enable low-latency real-time magnetic resonance (MR) imaging applications with high temporal resolution such as interstitial percutaneous needle interventions or MR-guided radiotherapy.To accelerate the image reconstruction of radially undersampled 2D k-space data, we propose a machine learning (ML) model that consists of a single fully connected linear layer to interpolate radial k-space data to a Cartesian grid, followed by a conventional 2D inverse fast Fourier transform. This k-space-to-image ML model was trained on synthetic data from natural images. It was evaluated with respect to image quality (mean squared error (MSE) compared to ground truth where available) and reconstruction time both on synthetic data with undersampling factors R between 2 and 10 as well as on radial k-space data from MR measurements on two different MRI systems. For comparison, conventional non-iterative zero-filling non-uniform fast Fourier transform (NUFFT) reconstruction and compressed sensing (CS) reconstruction were used.On synthetic data, the ML model achieved better median MSE values than the non-iterative NUFFT reconstruction. The interquartile ranges of the MSE distributions overlapped for the ML and CS reconstructions for all R. Reconstruction times of the ML approach were shorter than for NUFFT and substantially shorter than for CS reconstructions. The generalizability (for real MRI data) of the ML model was demonstrated by reconstructing 0.35-tesla MR-Linac dynamic measurements of three volunteers and phantom data from a diagnostic 1.5-tesla MRI system; the median reconstruction time for the coil-combined images was much shorter than for the conventional approach (ML:

Suggested Citation

  • Johanna Topalis & Jakob Dexl & Katharina Jeblick & Rabea Klaar & Christopher Kurz & Timo Löhr & Andreas Mittermeier & Balthasar Schachtner & Anna Theresa Stüber & Tobias Weber & Philipp Wesp & Jens Ri, 2025. "Fast machine learning image reconstruction of radially undersampled k-space data for low-latency real-time MRI," PLOS ONE, Public Library of Science, vol. 20(11), pages 1-19, November.
  • Handle: RePEc:plo:pone00:0334604
    DOI: 10.1371/journal.pone.0334604
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