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Small molecules restore mutant mitochondrial DNA polymerase activity

Author

Listed:
  • Sebastian Valenzuela

    (University of Gothenburg)

  • Xuefeng Zhu

    (University of Gothenburg)

  • Bertil Macao

    (University of Gothenburg)

  • Mattias Stamgren

    (Pretzel Therapeutics)

  • Carol Geukens

    (Pretzel Therapeutics)

  • Paul S. Charifson

    (Pretzel Therapeutics)

  • Gunther Kern

    (Pretzel Therapeutics)

  • Emily Hoberg

    (University of Gothenburg)

  • Louise Jenninger

    (University of Gothenburg)

  • Anja V. Gruszczyk

    (Pretzel Therapeutics)

  • Seoeun Lee

    (University of Gothenburg)

  • Katarina A. S. Johansson

    (University of Gothenburg)

  • Javier Miralles Fusté

    (Pretzel Therapeutics)

  • Yonghong Shi

    (Pretzel Therapeutics)

  • S. Jordan Kerns

    (Pretzel Therapeutics)

  • Laleh Arabanian

    (Pretzel Therapeutics)

  • Gabriel Martinez Botella

    (Pretzel Therapeutics)

  • Sofie Ekström

    (Pretzel Therapeutics)

  • Jeremy Green

    (Pretzel Therapeutics)

  • Andrew M. Griffin

    (Pretzel Therapeutics)

  • Carlos Pardo-Hernández

    (Pretzel Therapeutics)

  • Thomas A. Keating

    (Pretzel Therapeutics)

  • Barbara Küppers-Munther

    (Pretzel Therapeutics)

  • Nils-Göran Larsson

    (Karolinska Institutet)

  • Cindy Phan

    (Pretzel Therapeutics)

  • Viktor Posse

    (Pretzel Therapeutics)

  • Juli E. Jones

    (Pretzel Therapeutics)

  • Xie Xie

    (Pretzel Therapeutics)

  • Simon Giroux

    (Pretzel Therapeutics)

  • Claes M. Gustafsson

    (University of Gothenburg)

  • Maria Falkenberg

    (University of Gothenburg)

Abstract

Mammalian mitochondrial DNA (mtDNA) is replicated by DNA polymerase γ (POLγ), a heterotrimeric complex consisting of a catalytic POLγA subunit and two accessory POLγB subunits1. More than 300 mutations in POLG, the gene encoding the catalytic subunit, have been linked to severe, progressive conditions with high rates of morbidity and mortality, for which no treatment exists2. Here we report on the discovery and characterization of PZL-A, a first-in-class small-molecule activator of mtDNA synthesis that is capable of restoring function to the most common mutant variants of POLγ. PZL-A binds to an allosteric site at the interface between the catalytic POLγA subunit and the proximal POLγB subunit, a region that is unaffected by nearly all disease-causing mutations. The compound restores wild-type-like activity to mutant forms of POLγ in vitro and activates mtDNA synthesis in cells from paediatric patients with lethal POLG disease, thereby enhancing biogenesis of the oxidative phosphorylation machinery and cellular respiration. Our work demonstrates that a small molecule can restore function to mutant DNA polymerases, offering a promising avenue for treating POLG disorders and other severe conditions linked to depletion of mtDNA.

Suggested Citation

  • Sebastian Valenzuela & Xuefeng Zhu & Bertil Macao & Mattias Stamgren & Carol Geukens & Paul S. Charifson & Gunther Kern & Emily Hoberg & Louise Jenninger & Anja V. Gruszczyk & Seoeun Lee & Katarina A., 2025. "Small molecules restore mutant mitochondrial DNA polymerase activity," Nature, Nature, vol. 642(8067), pages 501-507, June.
  • Handle: RePEc:nat:nature:v:642:y:2025:i:8067:d:10.1038_s41586-025-08856-9
    DOI: 10.1038/s41586-025-08856-9
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