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Reduced sensitivity of SARS-CoV-2 variant Delta to antibody neutralization

Author

Listed:
  • Delphine Planas

    (Institut Pasteur
    Vaccine Research Institute)

  • David Veyer

    (Université de Paris and Sorbonne Université
    Hôpital Européen Georges Pompidou, Assistance Publique des Hôpitaux de Paris)

  • Artem Baidaliuk

    (Institut Pasteur)

  • Isabelle Staropoli

    (Institut Pasteur)

  • Florence Guivel-Benhassine

    (Institut Pasteur)

  • Maaran Michael Rajah

    (Institut Pasteur
    Université de Paris, Sorbonne Paris Cité)

  • Cyril Planchais

    (Institut Pasteur)

  • Françoise Porrot

    (Institut Pasteur)

  • Nicolas Robillard

    (Hôpital Européen Georges Pompidou, Assistance Publique des Hôpitaux de Paris)

  • Julien Puech

    (Hôpital Européen Georges Pompidou, Assistance Publique des Hôpitaux de Paris)

  • Matthieu Prot

    (Institut Pasteur)

  • Floriane Gallais

    (CHU de Strasbourg, Laboratoire de Virologie
    Université de Strasbourg, INSERM)

  • Pierre Gantner

    (CHU de Strasbourg, Laboratoire de Virologie
    Université de Strasbourg, INSERM)

  • Aurélie Velay

    (CHU de Strasbourg, Laboratoire de Virologie
    Université de Strasbourg, INSERM)

  • Julien Guen

    (Service de Gériatrie, Hôpital Européen Georges Pompidou, Assistance Publique des Hôpitaux de Paris)

  • Najiby Kassis-Chikhani

    (Hôpital Européen Georges Pompidou, Assistance Publique des Hôpitaux de Paris)

  • Dhiaeddine Edriss

    (Hôpital Européen Georges Pompidou, Assistance Publique des Hôpitaux de Paris)

  • Laurent Belec

    (Hôpital Européen Georges Pompidou, Assistance Publique des Hôpitaux de Paris)

  • Aymeric Seve

    (CHR d’Orléans, Service de Maladies Infectieuses)

  • Laura Courtellemont

    (CHR d’Orléans, Service de Maladies Infectieuses)

  • Hélène Péré

    (Université de Paris and Sorbonne Université)

  • Laurent Hocqueloux

    (CHR d’Orléans, Service de Maladies Infectieuses)

  • Samira Fafi-Kremer

    (CHU de Strasbourg, Laboratoire de Virologie
    Université de Strasbourg, INSERM)

  • Thierry Prazuck

    (CHR d’Orléans, Service de Maladies Infectieuses)

  • Hugo Mouquet

    (Institut Pasteur)

  • Timothée Bruel

    (Institut Pasteur
    Vaccine Research Institute)

  • Etienne Simon-Lorière

    (Institut Pasteur)

  • Felix A. Rey

    (Institut Pasteur)

  • Olivier Schwartz

    (Institut Pasteur
    Vaccine Research Institute)

Abstract

The SARS-CoV-2 B.1.617 lineage was identified in October 2020 in India1–5. Since then, it has become dominant in some regions of India and in the UK, and has spread to many other countries6. The lineage includes three main subtypes (B1.617.1, B.1.617.2 and B.1.617.3), which contain diverse mutations in the N-terminal domain (NTD) and the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein that may increase the immune evasion potential of these variants. B.1.617.2—also termed the Delta variant—is believed to spread faster than other variants. Here we isolated an infectious strain of the Delta variant from an individual with COVID-19 who had returned to France from India. We examined the sensitivity of this strain to monoclonal antibodies and to antibodies present in sera from individuals who had recovered from COVID-19 (hereafter referred to as convalescent individuals) or who had received a COVID-19 vaccine, and then compared this strain with other strains of SARS-CoV-2. The Delta variant was resistant to neutralization by some anti-NTD and anti-RBD monoclonal antibodies, including bamlanivimab, and these antibodies showed impaired binding to the spike protein. Sera collected from convalescent individuals up to 12 months after the onset of symptoms were fourfold less potent against the Delta variant relative to the Alpha variant (B.1.1.7). Sera from individuals who had received one dose of the Pfizer or the AstraZeneca vaccine had a barely discernible inhibitory effect on the Delta variant. Administration of two doses of the vaccine generated a neutralizing response in 95% of individuals, with titres three- to fivefold lower against the Delta variant than against the Alpha variant. Thus, the spread of the Delta variant is associated with an escape from antibodies that target non-RBD and RBD epitopes of the spike protein.

Suggested Citation

  • Delphine Planas & David Veyer & Artem Baidaliuk & Isabelle Staropoli & Florence Guivel-Benhassine & Maaran Michael Rajah & Cyril Planchais & Françoise Porrot & Nicolas Robillard & Julien Puech & Matth, 2021. "Reduced sensitivity of SARS-CoV-2 variant Delta to antibody neutralization," Nature, Nature, vol. 596(7871), pages 276-280, August.
  • Handle: RePEc:nat:nature:v:596:y:2021:i:7871:d:10.1038_s41586-021-03777-9
    DOI: 10.1038/s41586-021-03777-9
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