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Structure of the V. cholerae Na+-pumping NADH:quinone oxidoreductase

Author

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  • Julia Steuber

    (Garbenstrasse 30, University of Hohenheim, 70599 Stuttgart, Germany)

  • Georg Vohl

    (Institute for Neuropathology, University of Freiburg, Breisacher Strasse 64, 79106 Freiburg, Germany
    Hermann-Staudinger-Graduate school, University of Freiburg, Hebelstrasse 27, 79104 Freiburg, Germany)

  • Marco S. Casutt

    (Institute for Neuropathology, University of Freiburg, Breisacher Strasse 64, 79106 Freiburg, Germany)

  • Thomas Vorburger

    (Garbenstrasse 30, University of Hohenheim, 70599 Stuttgart, Germany)

  • Kay Diederichs

    (University of Konstanz, Universitätsstrasse 10, 78457 Konstanz, Germany)

  • Günter Fritz

    (Institute for Neuropathology, University of Freiburg, Breisacher Strasse 64, 79106 Freiburg, Germany)

Abstract

NADH oxidation in the respiratory chain is coupled to ion translocation across the membrane to build up an electrochemical gradient. The sodium-translocating NADH:quinone oxidoreductase (Na+-NQR), a membrane protein complex widespread among pathogenic bacteria, consists of six subunits, NqrA, B, C, D, E and F. To our knowledge, no structural information on the Na+-NQR complex has been available until now. Here we present the crystal structure of the Na+-NQR complex at 3.5 Å resolution. The arrangement of cofactors both at the cytoplasmic and the periplasmic side of the complex, together with a hitherto unknown iron centre in the midst of the membrane-embedded part, reveals an electron transfer pathway from the NADH-oxidizing cytoplasmic NqrF subunit across the membrane to the periplasmic NqrC, and back to the quinone reduction site on NqrA located in the cytoplasm. A sodium channel was localized in subunit NqrB, which represents the largest membrane subunit of the Na+-NQR and is structurally related to urea and ammonia transporters. On the basis of the structure we propose a mechanism of redox-driven Na+ translocation where the change in redox state of the flavin mononucleotide cofactor in NqrB triggers the transport of Na+ through the observed channel.

Suggested Citation

  • Julia Steuber & Georg Vohl & Marco S. Casutt & Thomas Vorburger & Kay Diederichs & Günter Fritz, 2014. "Structure of the V. cholerae Na+-pumping NADH:quinone oxidoreductase," Nature, Nature, vol. 516(7529), pages 62-67, December.
  • Handle: RePEc:nat:nature:v:516:y:2014:i:7529:d:10.1038_nature14003
    DOI: 10.1038/nature14003
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    Cited by:

    1. Stella Vitt & Simone Prinz & Martin Eisinger & Ulrich Ermler & Wolfgang Buckel, 2022. "Purification and structural characterization of the Na+-translocating ferredoxin: NAD+ reductase (Rnf) complex of Clostridium tetanomorphum," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
    2. Jun-ichi Kishikawa & Moe Ishikawa & Takahiro Masuya & Masatoshi Murai & Yuki Kitazumi & Nicole L. Butler & Takayuki Kato & Blanca Barquera & Hideto Miyoshi, 2022. "Cryo-EM structures of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae," Nature Communications, Nature, vol. 13(1), pages 1-11, December.

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