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Taxon-specific aerosolization of bacteria and viruses in an experimental ocean-atmosphere mesocosm

Author

Listed:
  • Jennifer M. Michaud

    (University of California San Diego)

  • Luke R. Thompson

    (University of California San Diego
    University of Southern Mississippi
    National Oceanic and Atmospheric Administration, stationed at Southwest Fisheries Science Center)

  • Drishti Kaul

    (J. Craig Venter Institute)

  • Josh L. Espinoza

    (J. Craig Venter Institute)

  • R. Alexander Richter

    (J. Craig Venter Institute)

  • Zhenjiang Zech Xu

    (University of California San Diego)

  • Christopher Lee

    (University of California San Diego)

  • Kevin M. Pham

    (University of California San Diego)

  • Charlotte M. Beall

    (Scripps Institution of Oceanography)

  • Francesca Malfatti

    (Scripps Institution of Oceanography
    Istituto Nazionale di Oceanografia e di Geofisica Sperimentale)

  • Farooq Azam

    (Scripps Institution of Oceanography)

  • Rob Knight

    (University of California San Diego
    University of California San Diego
    University of California San Diego)

  • Michael D. Burkart

    (University of California San Diego)

  • Christopher L. Dupont

    (J. Craig Venter Institute)

  • Kimberly A. Prather

    (University of California San Diego
    Scripps Institution of Oceanography)

Abstract

Ocean-derived, airborne microbes play important roles in Earth’s climate system and human health, yet little is known about factors controlling their transfer from the ocean to the atmosphere. Here, we study microbiomes of isolated sea spray aerosol (SSA) collected in a unique ocean–atmosphere facility and demonstrate taxon-specific aerosolization of bacteria and viruses. These trends are conserved within taxonomic orders and classes, and temporal variation in aerosolization is similarly shared by related taxa. We observe enhanced transfer into SSA of Actinobacteria, certain Gammaproteobacteria, and lipid-enveloped viruses; conversely, Flavobacteriia, some Alphaproteobacteria, and Caudovirales are generally under-represented in SSA. Viruses do not transfer to SSA as efficiently as bacteria. The enrichment of mycolic acid-coated Corynebacteriales and lipid-enveloped viruses (inferred from genomic comparisons) suggests that hydrophobic properties increase transport to the sea surface and SSA. Our results identify taxa relevant to atmospheric processes and a framework to further elucidate aerosolization mechanisms influencing microbial and viral transport pathways.

Suggested Citation

  • Jennifer M. Michaud & Luke R. Thompson & Drishti Kaul & Josh L. Espinoza & R. Alexander Richter & Zhenjiang Zech Xu & Christopher Lee & Kevin M. Pham & Charlotte M. Beall & Francesca Malfatti & Farooq, 2018. "Taxon-specific aerosolization of bacteria and viruses in an experimental ocean-atmosphere mesocosm," Nature Communications, Nature, vol. 9(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:9:y:2018:i:1:d:10.1038_s41467-018-04409-z
    DOI: 10.1038/s41467-018-04409-z
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