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Using mutability landscapes of a promiscuous tautomerase to guide the engineering of enantioselective Michaelases

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  • Jan-Ytzen van der Meer

    (Groningen Research Institute of Pharmacy, University of Groningen)

  • Harshwardhan Poddar

    (Groningen Research Institute of Pharmacy, University of Groningen)

  • Bert-Jan Baas

    (Groningen Research Institute of Pharmacy, University of Groningen
    Present address: Division of Medicinal Chemistry, College of Pharmacy, University of Texas, Austin, Texas 78712, USA)

  • Yufeng Miao

    (Groningen Research Institute of Pharmacy, University of Groningen
    Present address: Asano Active Enzyme Molecule Project, ERATO, Japan Science and Technology Agency, 5180 Kurokawa, Imizu, Toyama 939-0398, Japan)

  • Mehran Rahimi

    (Groningen Research Institute of Pharmacy, University of Groningen)

  • Andreas Kunzendorf

    (Groningen Research Institute of Pharmacy, University of Groningen)

  • Ronald van Merkerk

    (Groningen Research Institute of Pharmacy, University of Groningen)

  • Pieter G. Tepper

    (Groningen Research Institute of Pharmacy, University of Groningen)

  • Edzard M. Geertsema

    (Groningen Research Institute of Pharmacy, University of Groningen
    Present address: Institute for Life Science and Technology, Hanze University of Applied Sciences, Zernikeplein 11, 9747 AS Groningen)

  • Andy-Mark W. H. Thunnissen

    (Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen)

  • Wim J. Quax

    (Groningen Research Institute of Pharmacy, University of Groningen)

  • Gerrit J. Poelarends

    (Groningen Research Institute of Pharmacy, University of Groningen)

Abstract

The Michael-type addition reaction is widely used in organic synthesis for carbon–carbon bond formation. However, biocatalytic methodologies for this type of reaction are scarce, which is related to the fact that enzymes naturally catalysing carbon–carbon bond-forming Michael-type additions are rare. A promising template to develop new biocatalysts for carbon–carbon bond formation is the enzyme 4-oxalocrotonate tautomerase, which exhibits promiscuous Michael-type addition activity. Here we present mutability landscapes for the expression, tautomerase and Michael-type addition activities, and enantioselectivity of 4-oxalocrotonate tautomerase. These maps of neutral, beneficial and detrimental amino acids for each residue position and enzyme property provide detailed insight into sequence–function relationships. This offers exciting opportunities for enzyme engineering, which is illustrated by the redesign of 4-oxalocrotonate tautomerase into two enantiocomplementary ‘Michaelases’. These ‘Michaelases’ catalyse the asymmetric addition of acetaldehyde to various nitroolefins, providing access to both enantiomers of γ-nitroaldehydes, which are important precursors for pharmaceutically active γ-aminobutyric acid derivatives.

Suggested Citation

  • Jan-Ytzen van der Meer & Harshwardhan Poddar & Bert-Jan Baas & Yufeng Miao & Mehran Rahimi & Andreas Kunzendorf & Ronald van Merkerk & Pieter G. Tepper & Edzard M. Geertsema & Andy-Mark W. H. Thunniss, 2016. "Using mutability landscapes of a promiscuous tautomerase to guide the engineering of enantioselective Michaelases," Nature Communications, Nature, vol. 7(1), pages 1-16, April.
  • Handle: RePEc:nat:natcom:v:7:y:2016:i:1:d:10.1038_ncomms10911
    DOI: 10.1038/ncomms10911
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    Cited by:

    1. Dylan Alexander Carlin & Siena Hapig-Ward & Bill Wayne Chan & Natalie Damrau & Mary Riley & Ryan W Caster & Bowen Bethards & Justin B Siegel, 2017. "Thermal stability and kinetic constants for 129 variants of a family 1 glycoside hydrolase reveal that enzyme activity and stability can be separately designed," PLOS ONE, Public Library of Science, vol. 12(5), pages 1-13, May.

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