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Temporal transcriptional regulation of mitochondrial morphology primes activity-dependent circuit connectivity

Author

Listed:
  • Iryna Mohylyak

    (Hôpital Pitié-Salpêtrière)

  • Maheva Andriatsilavo

    (Hôpital Pitié-Salpêtrière)

  • Mercedes Bengochea

    (Hôpital Pitié-Salpêtrière)

  • Carlos Pascual-Caro

    (Hôpital Pitié-Salpêtrière)

  • Noemi Asfogo

    (Hôpital Pitié-Salpêtrière)

  • Sara Fonseca-Topp

    (Hôpital Pitié-Salpêtrière)

  • Natasha Danda

    (Hôpital Pitié-Salpêtrière)

  • Marlene Cassar

    (Hôpital Pitié-Salpêtrière)

  • Corentine Marie

    (Hôpital Pitié-Salpêtrière)

  • Zeynep Kalender Atak

    (Center for Brain and Disease Research – VIB-KU Leuven)

  • Maxime Waegeneer

    (Center for Brain and Disease Research – VIB-KU Leuven)

  • Stein Aerts

    (Center for Brain and Disease Research – VIB-KU Leuven)

  • Olga Corti

    (Hôpital Pitié-Salpêtrière)

  • Jaime Juan-Sanz

    (Hôpital Pitié-Salpêtrière)

  • Bassem A. Hassan

    (Hôpital Pitié-Salpêtrière)

Abstract

Synaptic connectivity during development is known to require rapid local regulation of axonal organelles. Whether this fundamental and conserved aspect of neuronal cell biology is orchestrated by a dedicated developmental program is unknown. We hypothesized that developmental transcription factors regulate critical parameters of organelle structure and function which contribute to circuit wiring. We combined cell type-specific transcriptomics with a genetic screen to discover such factors. We identified Drosophila CG7101, which we rename mitochondrial integrity regulator of neuronal architecture (Mirana), as a temporal developmental regulator of neuronal mitochondrial quality control genes, including Pink1. Remarkably, a brief developmental downregulation of either Mirana or Pink1 suffices to cause long-lasting changes in mitochondrial morphology and abrogates neuronal connectivity which can be rescued by Pink1 expression. We show that Mirana has functional homology to the mammalian transcription factor TZAP whose loss leads to changes in mitochondrial function and reduced neurotransmitter release in hippocampal neurons. Our findings establish temporal developmental transcriptional regulation of mitochondrial morphology as a prerequisite for the priming and maintenance of activity-dependent synaptic connectivity.

Suggested Citation

  • Iryna Mohylyak & Maheva Andriatsilavo & Mercedes Bengochea & Carlos Pascual-Caro & Noemi Asfogo & Sara Fonseca-Topp & Natasha Danda & Marlene Cassar & Corentine Marie & Zeynep Kalender Atak & Maxime W, 2025. "Temporal transcriptional regulation of mitochondrial morphology primes activity-dependent circuit connectivity," Nature Communications, Nature, vol. 16(1), pages 1-19, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-62908-2
    DOI: 10.1038/s41467-025-62908-2
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    References listed on IDEAS

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    1. Ferdi Ridvan Kiral & Gerit Arne Linneweber & Thomas Mathejczyk & Svilen Veselinov Georgiev & Mathias F. Wernet & Bassem A. Hassan & Max Kleist & Peter Robin Hiesinger, 2020. "Autophagy-dependent filopodial kinetics restrict synaptic partner choice during Drosophila brain wiring," Nature Communications, Nature, vol. 11(1), pages 1-14, December.
    2. Susanne Nichterwitz & Geng Chen & Julio Aguila Benitez & Marlene Yilmaz & Helena Storvall & Ming Cao & Rickard Sandberg & Qiaolin Deng & Eva Hedlund, 2016. "Laser capture microscopy coupled with Smart-seq2 for precise spatial transcriptomic profiling," Nature Communications, Nature, vol. 7(1), pages 1-11, November.
    3. Benjamin Loppin & Emilie Bonnefoy & Caroline Anselme & Anne Laurençon & Timothy L. Karr & Pierre Couble, 2005. "The histone H3.3 chaperone HIRA is essential for chromatin assembly in the male pronucleus," Nature, Nature, vol. 437(7063), pages 1386-1390, October.
    4. Tommy L. Lewis & Seok-Kyu Kwon & Annie Lee & Reuben Shaw & Franck Polleux, 2018. "MFF-dependent mitochondrial fission regulates presynaptic release and axon branching by limiting axonal mitochondria size," Nature Communications, Nature, vol. 9(1), pages 1-15, December.
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