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DNA nanoflower Oligo-PROTAC for targeted degradation of FUS to treat neurodegenerative diseases

Author

Listed:
  • Ruixin Ge

    (Shandong Normal University)

  • Miao Chen

    (Shandong University of Technology)

  • Sijin Wu

    (Xi’an Jiaotong-Liverpool University
    Xi’an Jiaotong-Liverpool University)

  • Sirui Huang

    (Tianjin Medical University)

  • Ping Zhou

    (Shandong Normal University)

  • Minghui Cao

    (Shandong Normal University)

  • Fan Zhang

    (Shandong Normal University)

  • Jinzhi Zang

    (Shandong Normal University)

  • Yigao Zhu

    (Shandong Normal University)

  • Jingrui Li

    (Shandong University of Technology)

  • Guilin Ni

    (Xi’an Jiaotong-Liverpool University
    Xi’an Jiaotong-Liverpool University)

  • Zhihao Yang

    (Tianjin Medical University)

  • Qingchao Li

    (Shandong Normal University)

  • Wei Pan

    (Shandong Normal University)

  • Liang Zhang

    (Jinan Central Hospital Affiliated to Shandong First Medical University)

  • Min Liu

    (Haihe Laboratory of Cell Ecosystem
    Shandong Normal University)

  • Chenghao Xuan

    (Tianjin Medical University)

  • Haiyang Yu

    (South San Francisco)

  • Jun Zhou

    (Shandong Normal University
    Nankai University)

  • Songbo Xie

    (Tianjin Medical University General Hospital)

Abstract

Oligonucleotide-based medicine faces challenges in efficiently crossing the blood-brain barrier and rapidly reducing toxic proteins. To address these challenges, here we establish an integrated modality, brain-penetrant DNA nanoflowers incorporated with oligonucleotide-based proteolysis targeting chimeras. Using FUS as a proof-of-concept, mutations of which cause frontotemporal dementia and amyotrophic lateral sclerosis, we demonstrate that a FUS-engaging RNA oligonucleotide crosslinked to a ligand for Cereblon efficiently degrade FUS and its cytoplasmic disease-causing mutants through a ubiquitin-proteasomal pathway. The DNA nanoflower contains hundreds of oligonucleotide binding sites and transferrin receptor-engaging aptamers, allowing efficient loading of the oligonucleotide-based degrader and engaging transferrin receptors for brain delivery. A single dose intravenous injection of this modality reaches brain parenchyma within 2 h and degrades 80% FUS protein there, sustained for two weeks without noticeable toxicity. DNA nanoflower oligonucleotide-based degrader is a therapeutic strategy for neurodegenerative diseases that leverages the advantages of designer oligonucleotides and targeted protein degradation.

Suggested Citation

  • Ruixin Ge & Miao Chen & Sijin Wu & Sirui Huang & Ping Zhou & Minghui Cao & Fan Zhang & Jinzhi Zang & Yigao Zhu & Jingrui Li & Guilin Ni & Zhihao Yang & Qingchao Li & Wei Pan & Liang Zhang & Min Liu & , 2025. "DNA nanoflower Oligo-PROTAC for targeted degradation of FUS to treat neurodegenerative diseases," Nature Communications, Nature, vol. 16(1), pages 1-15, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-60039-2
    DOI: 10.1038/s41467-025-60039-2
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    References listed on IDEAS

    as
    1. Yuan Liu & Jingwen Yang & Tianlu Wang & Mei Luo & Yamei Chen & Chengxuan Chen & Ze’ev Ronai & Yubin Zhou & Eytan Ruppin & Leng Han, 2023. "Expanding PROTACtable genome universe of E3 ligases," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    2. Kylie S. Chew & Robert C. Wells & Arash Moshkforoush & Darren Chan & Kendra J. Lechtenberg & Hai L. Tran & Johann Chow & Do Jin Kim & Yaneth Robles-Colmenares & Devendra B. Srivastava & Raymond K. Ton, 2023. "Author Correction: CD98hc is a target for brain delivery of biotherapeutics," Nature Communications, Nature, vol. 14(1), pages 1-1, December.
    3. Kylie S. Chew & Robert C. Wells & Arash Moshkforoush & Darren Chan & Kendra J. Lechtenberg & Hai L. Tran & Johann Chow & Do Jin Kim & Yaneth Robles-Colmenares & Devendra B. Srivastava & Raymond K. Ton, 2023. "CD98hc is a target for brain delivery of biotherapeutics," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
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