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A covalent BTK ternary complex compatible with targeted protein degradation

Author

Listed:
  • James Schiemer

    (Pfizer Worldwide Research and Development)

  • Andrew Maxwell

    (Pfizer Worldwide Research and Development)

  • Reto Horst

    (Pfizer Worldwide Research and Development)

  • Shenping Liu

    (Pfizer Worldwide Research and Development)

  • Daniel P. Uccello

    (Pfizer Worldwide Research and Development)

  • Kris Borzilleri

    (Pfizer Worldwide Research and Development)

  • Nisha Rajamohan

    (Pfizer Worldwide Research and Development)

  • Matthew F. Brown

    (Pfizer Worldwide Research and Development)

  • Matthew F. Calabrese

    (Pfizer Worldwide Research and Development)

Abstract

Targeted protein degradation using heterobifunctional chimeras holds the potential to expand target space and grow the druggable proteome. Most acutely, this provides an opportunity to target proteins that lack enzymatic activity or have otherwise proven intractable to small molecule inhibition. Limiting this potential, however, is the remaining need to develop a ligand for the target of interest. While a number of challenging proteins have been successfully targeted by covalent ligands, unless this modification affects form or function, it may lack the ability to drive a biological response. Bridging covalent ligand discovery with chimeric degrader design has emerged as a potential mechanism to advance both fields. In this work, we employ a set of biochemical and cellular tools to deconvolute the role of covalent modification in targeted protein degradation using Bruton’s tyrosine kinase. Our results reveal that covalent target modification is fundamentally compatible with the protein degrader mechanism of action.

Suggested Citation

  • James Schiemer & Andrew Maxwell & Reto Horst & Shenping Liu & Daniel P. Uccello & Kris Borzilleri & Nisha Rajamohan & Matthew F. Brown & Matthew F. Calabrese, 2023. "A covalent BTK ternary complex compatible with targeted protein degradation," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-36738-z
    DOI: 10.1038/s41467-023-36738-z
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    References listed on IDEAS

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    1. Jonathan M. Ostrem & Ulf Peters & Martin L. Sos & James A. Wells & Kevan M. Shokat, 2013. "K-Ras(G12C) inhibitors allosterically control GTP affinity and effector interactions," Nature, Nature, vol. 503(7477), pages 548-551, November.
    2. Wen-Hao Guo & Xiaoli Qi & Xin Yu & Yang Liu & Chan-I Chung & Fang Bai & Xingcheng Lin & Dong Lu & Lingfei Wang & Jianwei Chen & Lynn Hsiao Su & Krystle J. Nomie & Feng Li & Meng C. Wang & Xiaokun Shu , 2020. "Enhancing intracellular accumulation and target engagement of PROTACs with reversible covalent chemistry," Nature Communications, Nature, vol. 11(1), pages 1-16, December.
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