IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v12y2021i1d10.1038_s41467-021-27032-x.html
   My bibliography  Save this article

Human RIPK3 maintains MLKL in an inactive conformation prior to cell death by necroptosis

Author

Listed:
  • Yanxiang Meng

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Katherine A. Davies

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Cheree Fitzgibbon

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Samuel N. Young

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade)

  • Sarah E. Garnish

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Christopher R. Horne

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Cindy Luo

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade)

  • Jean-Marc Garnier

    (SYNthesis med chem, 30 Flemington Rd)

  • Lung-Yu Liang

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Angus D. Cowan

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Andre L. Samson

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Guillaume Lessene

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Jarrod J. Sandow

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • Peter E. Czabotar

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

  • James M. Murphy

    (Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade
    Department of Medical Biology, University of Melbourne)

Abstract

The ancestral origins of the lytic cell death mode, necroptosis, lie in host defense. However, the dysregulation of necroptosis in inflammatory diseases has led to widespread interest in targeting the pathway therapeutically. This mode of cell death is executed by the terminal effector, the MLKL pseudokinase, which is licensed to kill following phosphorylation by its upstream regulator, RIPK3 kinase. The precise molecular details underlying MLKL activation are still emerging and, intriguingly, appear to mechanistically-diverge between species. Here, we report the structure of the human RIPK3 kinase domain alone and in complex with the MLKL pseudokinase. These structures reveal how human RIPK3 structurally differs from its mouse counterpart, and how human RIPK3 maintains MLKL in an inactive conformation prior to induction of necroptosis. Residues within the RIPK3:MLKL C-lobe interface are crucial to complex assembly and necroptotic signaling in human cells, thereby rationalizing the strict species specificity governing RIPK3 activation of MLKL.

Suggested Citation

  • Yanxiang Meng & Katherine A. Davies & Cheree Fitzgibbon & Samuel N. Young & Sarah E. Garnish & Christopher R. Horne & Cindy Luo & Jean-Marc Garnier & Lung-Yu Liang & Angus D. Cowan & Andre L. Samson &, 2021. "Human RIPK3 maintains MLKL in an inactive conformation prior to cell death by necroptosis," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
  • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-27032-x
    DOI: 10.1038/s41467-021-27032-x
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-021-27032-x
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-021-27032-x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Katherine A. Davies & Cheree Fitzgibbon & Samuel N. Young & Sarah E. Garnish & Wayland Yeung & Diane Coursier & Richard W. Birkinshaw & Jarrod J. Sandow & Wil I. L. Lehmann & Lung-Yu Liang & Isabelle , 2020. "Distinct pseudokinase domain conformations underlie divergent activation mechanisms among vertebrate MLKL orthologues," Nature Communications, Nature, vol. 11(1), pages 1-11, December.
    2. Emma J. Petrie & Jarrod J. Sandow & Annette V. Jacobsen & Brian J. Smith & Michael D. W. Griffin & Isabelle S. Lucet & Weiwen Dai & Samuel N. Young & Maria C. Tanzer & Ahmad Wardak & Lung-Yu Liang & A, 2018. "Conformational switching of the pseudokinase domain promotes human MLKL tetramerization and cell death by necroptosis," Nature Communications, Nature, vol. 9(1), pages 1-15, December.
    3. Sarah E. Garnish & Yanxiang Meng & Akiko Koide & Jarrod J. Sandow & Eric Denbaum & Annette V. Jacobsen & Wayland Yeung & Andre L. Samson & Christopher R. Horne & Cheree Fitzgibbon & Samuel N. Young & , 2021. "Conformational interconversion of MLKL and disengagement from RIPK3 precede cell death by necroptosis," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
    4. Shin Murai & Yoshifumi Yamaguchi & Yoshitaka Shirasaki & Mai Yamagishi & Ryodai Shindo & Joanne M. Hildebrand & Ryosuke Miura & Osamu Nakabayashi & Mamoru Totsuka & Taichiro Tomida & Satomi Adachi-Aka, 2018. "A FRET biosensor for necroptosis uncovers two different modes of the release of DAMPs," Nature Communications, Nature, vol. 9(1), pages 1-17, December.
    5. Joanne M. Hildebrand & Maria Kauppi & Ian J. Majewski & Zikou Liu & Allison J. Cox & Sanae Miyake & Emma J. Petrie & Michael A. Silk & Zhixiu Li & Maria C. Tanzer & Gabriela Brumatti & Samuel N. Young, 2020. "A missense mutation in the MLKL brace region promotes lethal neonatal inflammation and hematopoietic dysfunction," Nature Communications, Nature, vol. 11(1), pages 1-16, December.
    6. Xia-lian Wu & Hong Hu & Xing-qi Dong & Jing Zhang & Jian Wang & Charles D. Schwieters & Jing Liu & Guo-xiang Wu & Bing Li & Jing-yu Lin & Hua-yi Wang & Jun-xia Lu, 2021. "The amyloid structure of mouse RIPK3 (receptor interacting protein kinase 3) in cell necroptosis," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Sarah E. Garnish & Katherine R. Martin & Maria Kauppi & Victoria E. Jackson & Rebecca Ambrose & Vik Ven Eng & Shene Chiou & Yanxiang Meng & Daniel Frank & Emma C. Tovey Crutchfield & Komal M. Patel & , 2023. "A common human MLKL polymorphism confers resistance to negative regulation by phosphorylation," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    2. Yanxiang Meng & Sarah E. Garnish & Katherine A. Davies & Katrina A. Black & Andrew P. Leis & Christopher R. Horne & Joanne M. Hildebrand & Hanadi Hoblos & Cheree Fitzgibbon & Samuel N. Young & Toby Di, 2023. "Phosphorylation-dependent pseudokinase domain dimerization drives full-length MLKL oligomerization," Nature Communications, Nature, vol. 14(1), pages 1-18, December.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Yanxiang Meng & Sarah E. Garnish & Katherine A. Davies & Katrina A. Black & Andrew P. Leis & Christopher R. Horne & Joanne M. Hildebrand & Hanadi Hoblos & Cheree Fitzgibbon & Samuel N. Young & Toby Di, 2023. "Phosphorylation-dependent pseudokinase domain dimerization drives full-length MLKL oligomerization," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
    2. Sarah E. Garnish & Katherine R. Martin & Maria Kauppi & Victoria E. Jackson & Rebecca Ambrose & Vik Ven Eng & Shene Chiou & Yanxiang Meng & Daniel Frank & Emma C. Tovey Crutchfield & Komal M. Patel & , 2023. "A common human MLKL polymorphism confers resistance to negative regulation by phosphorylation," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    3. Yuka Inaba & Emi Hashiuchi & Hitoshi Watanabe & Kumi Kimura & Yu Oshima & Kohsuke Tsuchiya & Shin Murai & Chiaki Takahashi & Michihiro Matsumoto & Shigetaka Kitajima & Yasuhiko Yamamoto & Masao Honda , 2023. "The transcription factor ATF3 switches cell death from apoptosis to necroptosis in hepatic steatosis in male mice," Nature Communications, Nature, vol. 14(1), pages 1-19, December.
    4. Christoph Grohmann & Charlene M. Magtoto & Joel R. Walker & Ngee Kiat Chua & Anna Gabrielyan & Mary Hall & Simon A. Cobbold & Stephen Mieruszynski & Martin Brzozowski & Daniel S. Simpson & Hao Dong & , 2022. "Development of NanoLuc-targeting protein degraders and a universal reporter system to benchmark tag-targeted degradation platforms," Nature Communications, Nature, vol. 13(1), pages 1-13, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-27032-x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.