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Mechanisms of microtubule dynamics and force generation examined with computational modeling and electron cryotomography

Author

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  • Nikita B. Gudimchuk

    (Lomonosov Moscow State University
    Russian Academy of Sciences
    Dmitry Rogachev National Research Center of Pediatric Hematology, Oncology and Immunology)

  • Evgeni V. Ulyanov

    (Lomonosov Moscow State University)

  • Eileen O’Toole

    (University of Colorado)

  • Cynthia L. Page

    (University of Colorado)

  • Dmitrii S. Vinogradov

    (Russian Academy of Sciences)

  • Garry Morgan

    (University of Colorado)

  • Gabriella Li

    (University of Colorado School of Medicine)

  • Jeffrey K. Moore

    (University of Colorado School of Medicine)

  • Ewa Szczesna

    (National Institute of Neurological Disorders and Stroke)

  • Antonina Roll-Mecak

    (National Institute of Neurological Disorders and Stroke)

  • Fazoil I. Ataullakhanov

    (Lomonosov Moscow State University
    Russian Academy of Sciences
    Dmitry Rogachev National Research Center of Pediatric Hematology, Oncology and Immunology)

  • J. Richard McIntosh

    (University of Colorado)

Abstract

Microtubules are dynamic tubulin polymers responsible for many cellular processes, including the capture and segregation of chromosomes during mitosis. In contrast to textbook models of tubulin self-assembly, we have recently demonstrated that microtubules elongate by addition of bent guanosine triphosphate tubulin to the tips of curving protofilaments. Here we explore this mechanism of microtubule growth using Brownian dynamics modeling and electron cryotomography. The previously described flaring shapes of growing microtubule tips are remarkably consistent under various assembly conditions, including different tubulin concentrations, the presence or absence of a polymerization catalyst or tubulin-binding drugs. Simulations indicate that development of substantial forces during microtubule growth and shortening requires a high activation energy barrier in lateral tubulin-tubulin interactions. Modeling offers a mechanism to explain kinetochore coupling to growing microtubule tips under assisting force, and it predicts a load-dependent acceleration of microtubule assembly, providing a role for the flared morphology of growing microtubule ends.

Suggested Citation

  • Nikita B. Gudimchuk & Evgeni V. Ulyanov & Eileen O’Toole & Cynthia L. Page & Dmitrii S. Vinogradov & Garry Morgan & Gabriella Li & Jeffrey K. Moore & Ewa Szczesna & Antonina Roll-Mecak & Fazoil I. Ata, 2020. "Mechanisms of microtubule dynamics and force generation examined with computational modeling and electron cryotomography," Nature Communications, Nature, vol. 11(1), pages 1-15, December.
  • Handle: RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-17553-2
    DOI: 10.1038/s41467-020-17553-2
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    Cited by:

    1. Yin-Wei Kuo & Mohammed Mahamdeh & Yazgan Tuna & Jonathon Howard, 2022. "The force required to remove tubulin from the microtubule lattice by pulling on its α-tubulin C-terminal tail," Nature Communications, Nature, vol. 13(1), pages 1-10, December.

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