IDEAS home Printed from https://ideas.repec.org/a/jss/jstsof/v024i07.html
   My bibliography  Save this article

Prototype Packages for Managing and Animating Longitudinal Network Data: dynamicnetwork and rSoNIA

Author

Listed:
  • Bender-deMol, Skye
  • Morris, Martina
  • Moody, James

Abstract

Work with longitudinal network survey data and the dynamic network outputs of the statnet ERGMs has demonstrated the need for consistent frameworks and data structures for expressing, storing, and manipulating information about networks that change in time. Motivated by our requirements for exchanging data among researchers and various analysis and visualization processes, we have created an R package dynamicnetwork that builds upon previous work in the network, statnet and sna packages and provides a limited functional implementation. This paper discusses design issues and considerations, describes classes and forms of dynamic data, and works through several examples to demonstrate the utility of the package. The functionality of the rSoNIA package that uses dynamicnetwork to exchange data with the Social Network Image Animator (SoNIA) software to create animated movies of changing networks from within R is also demonstrated.

Suggested Citation

  • Bender-deMol, Skye & Morris, Martina & Moody, James, 2008. "Prototype Packages for Managing and Animating Longitudinal Network Data: dynamicnetwork and rSoNIA," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 24(i07).
  • Handle: RePEc:jss:jstsof:v:024:i07
    DOI: http://hdl.handle.net/10.18637/jss.v024.i07
    as

    Download full text from publisher

    File URL: https://www.jstatsoft.org/index.php/jss/article/view/v024i07/v24i07.pdf
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/dynamicnetwork_0.0-4.tar.gz
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/dynamicnetwork_0.0-4.zip
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/rSoNIA_0.0-4.tar.gz
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/rSoNIA_0.0-4.zip
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/v24i07.R
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/buildInfectNet.R
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/infect.conrsmons.b1.10comseed.05.txt
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/tel.conrsmons.txt
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/5seedNoNghMomentary.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/5seedNoNgh5year.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/5seedNoNgh.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/faux20.swf
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/faux20.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/simSeedNormal.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/simSeedSustain.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/SimRaceSustain.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/simAgeSustain.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/simConcurSustain.mov
    Download Restriction: no

    File URL: https://www.jstatsoft.org/index.php/jss/article/downloadSuppFile/v024i07/10seed05take3.mov
    Download Restriction: no

    File URL: https://libkey.io/http://hdl.handle.net/10.18637/jss.v024.i07?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Hunter, David R. & Handcock, Mark S. & Butts, Carter T. & Goodreau, Steven M. & Morris, Martina, 2008. "ergm: A Package to Fit, Simulate and Diagnose Exponential-Family Models for Networks," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 24(i03).
    2. Butts, Carter T., 2008. "network: A Package for Managing Relational Data in R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 24(i02).
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Emily Casleton & Daniel J. Nordman & Mark S. Kaiser, 2022. "Modeling Transitivity in Local Structure Graph Models," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 84(1), pages 389-417, June.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Milad Abbasiharofteh & Tom Broekel, 2021. "Still in the shadow of the wall? The case of the Berlin biotechnology cluster," Environment and Planning A, , vol. 53(1), pages 73-94, February.
    2. repec:jss:jstsof:24:i07 is not listed on IDEAS
    3. Suesse Thomas & Chambers Ray, 2018. "Using Social Network Information for Survey Estimation," Journal of Official Statistics, Sciendo, vol. 34(1), pages 181-209, March.
    4. Johannes Pol, 2019. "Introduction to Network Modeling Using Exponential Random Graph Models (ERGM): Theory and an Application Using R-Project," Computational Economics, Springer;Society for Computational Economics, vol. 54(3), pages 845-875, October.
    5. Hunter, David R. & Goodreau, Steven M. & Handcock, Mark S., 2013. "ergm.userterms: A Template Package for Extending statnet," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 52(i02).
    6. Moeliono, Moira & Brockhaus, Maria & Gallemore, Caleb & Dwisatrio, Bimo & Maharani, Cynthia D. & Muharrom, Efrian & Pham, Thuy Thu, 2020. "REDD+ in Indonesia: A new mode of governance or just another project?," Forest Policy and Economics, Elsevier, vol. 121(C).
    7. Darko Cherepnalkoski & Andreas Karpf & Igor Mozetič & Miha Grčar, 2016. "Cohesion and Coalition Formation in the European Parliament: Roll-Call Votes and Twitter Activities," PLOS ONE, Public Library of Science, vol. 11(11), pages 1-27, November.
    8. Youyi Bi & Yunjian Qiu & Zhenghui Sha & Mingxian Wang & Yan Fu & Noshir Contractor & Wei Chen, 2021. "Modeling Multi-Year Customers’ Considerations and Choices in China’s Auto Market Using Two-Stage Bipartite Network Analysis," Networks and Spatial Economics, Springer, vol. 21(2), pages 365-385, June.
    9. Neal, Zachary & Domagalski, Rachel & Yan, Xiaoqin, 2020. "Party Control as a Context for Homophily in Collaborations among US House Representatives, 1981 -- 2015," OSF Preprints qwdxs, Center for Open Science.
    10. Prochnow, Tyler & Patterson, Megan S. & Hartnell, Logan & West, Geoffrey & Umstattd Meyer, M. Renée, 2021. "Implications of race and ethnicity for child physical activity and social connections at summer care programs," Children and Youth Services Review, Elsevier, vol. 127(C).
    11. Krivitsky, Pavel N., 2017. "Using contrastive divergence to seed Monte Carlo MLE for exponential-family random graph models," Computational Statistics & Data Analysis, Elsevier, vol. 107(C), pages 149-161.
    12. Ge, Erhao & Cairang, Dongzhi & Mace, Ruth, 2022. "Religiosity structures social networks in a Tibetan population," OSF Preprints qpa4b, Center for Open Science.
    13. Cody J. Dey & James S. Quinn, 2014. "Individual attributes and self-organizational processes affect dominance network structure in pukeko," Behavioral Ecology, International Society for Behavioral Ecology, vol. 25(6), pages 1402-1408.
    14. Parra, Diana C. & Dauti, Marsela & Harris, Jenine K. & Reyes, Lissette & Malta, Deborah C. & Brownson, Ross C. & Quintero, Mario A. & Pratt, Michael, 2011. "How does network structure affect partnerships for promoting physical activity? Evidence from Brazil and Colombia," Social Science & Medicine, Elsevier, vol. 73(9), pages 1365-1370.
    15. Ma, Ding & Yu, Qian & Li, Jing & Ge, Mengni, 2021. "Innovation diffusion enabler or barrier: An investigation of international patenting based on temporal exponential random graph models," Technology in Society, Elsevier, vol. 64(C).
    16. Groenen, Patrick J. F. & van de Velden, Michel, 2016. "Multidimensional Scaling by Majorization: A Review," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 73(i08).
    17. Ladan Ghahramani & Jalayer Khalilzadeh & Birendra KC, 2018. "Tour guides’ communication ecosystems: an inferential social network analysis approach," Information Technology & Tourism, Springer, vol. 20(1), pages 103-130, December.
    18. Lyubchich, Vyacheslav & Woodland, Ryan J., 2019. "Using isotope composition and other node attributes to predict edges in fish trophic networks," Statistics & Probability Letters, Elsevier, vol. 144(C), pages 63-68.
    19. Nunes, Matthew, 2015. "Statistical Analysis of Network Data with R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 66(b01).
    20. Nolan E. Phillips & Brian L. Levy & Robert J. Sampson & Mario L. Small & Ryan Q. Wang, 2021. "The Social Integration of American Cities: Network Measures of Connectedness Based on Everyday Mobility Across Neighborhoods," Sociological Methods & Research, , vol. 50(3), pages 1110-1149, August.
    21. Goodreau, Steven M. & Handcock, Mark S. & Hunter, David R. & Butts, Carter T. & Morris, Martina, 2008. "A statnet Tutorial," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 24(i09).

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:jss:jstsof:v:024:i07. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Christopher F. Baum (email available below). General contact details of provider: http://www.jstatsoft.org/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.