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Single Bit DNA Squeezer (SBDNAS) : An Enhancement of BDNAS Algorithm

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  • Alam Jahaan
  • T. N. Ravi

Abstract

DNA Sequences are repetitive and non - repetitive concatenation of the four nucleotides namely, Adenine, Guanine, Thymine and Cytosine which are bases in DNA molecules. These nucleotides form a double stranded helical structure with each nucleotide in one strand joined to its compliment on the other with hydrogen bonds using base pairing rules. Compression in general focusses on cost effectiveness which may be achieved by improving Space complexity, Time complexity and speed of transmission. This article presents a DNA sequence compression algorithm SBDNAS which is the enhancement of BDNAS algorithm, that compresses DNA sequences by replacing the nucleotides by single bits 0 or 1. SBDNAS comprises of two Phases, Pre-processing Phase and Coding Phase. Compression ratios are compared for efficiency for worst case, best case and average case.

Suggested Citation

  • Alam Jahaan & T. N. Ravi, 2017. "Single Bit DNA Squeezer (SBDNAS) : An Enhancement of BDNAS Algorithm," International Journal of Scientific Research in Computer Science, Engineering and Information Technology, International Journal of Scientific Research in Computer Science, Engineering and Information Technology, vol. 2(6), pages 860-864, December.
    • Handle: RePEc:jbh:ijsrcs:v2:y2017:i6:id:hcseit1726223
    Note: Article URL: https://ijsrcseit.com/CSEIT1726223
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