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A Machine Learning-Based Spatial Risk Mapping for Sustainable Groundwater Management Under Fluoride Contamination: A Case Study of Mastung, Balochistan

Author

Listed:
  • Nabeel Afzal Butt

    (National Centre of Artificial Intelligence, University of Engineering and Technology, Peshawar 25120, Pakistan)

  • Khan Muhammad

    (National Centre of Artificial Intelligence, University of Engineering and Technology, Peshawar 25120, Pakistan
    Department of Mining Engineering, University of Engineering and Technology, Peshawar 25000, Pakistan
    Department of Earth and Environmental Science, Camborne School of Mines, University of Exeter, Penryn TR10 9FE, UK)

  • Waqass Yaseen

    (Centre of Excellence in Mineralogy, University of Balochistan, Quetta 87300, Pakistan)

  • Shahid Bashir

    (Department of Electrical Engineering, University of Engineering and Technology, Peshawar 25000, Pakistan)

  • Muhammad Younis Khan

    (Department of Earth Science, Sultan Qaboos University, Muscat 123, Oman)

  • Asif Khan

    (Department of Mineral Resource Engineering, Pak-Austria Fachhochschule: Institute of Applied Sciences and Technology, Haripur 22620, Pakistan)

  • Umar Sadique

    (National Centre of Artificial Intelligence, University of Engineering and Technology, Peshawar 25120, Pakistan)

  • Saeed Uddin

    (Centre of Excellence in Mineralogy, University of Balochistan, Quetta 87300, Pakistan)

  • Razzaq Abdul Manan

    (Centre of Excellence in Mineralogy, University of Balochistan, Quetta 87300, Pakistan)

  • Muhammad Younas

    (National Centre of Artificial Intelligence, University of Engineering and Technology, Peshawar 25120, Pakistan
    Department of Mining Engineering, University of Engineering and Technology, Peshawar 25000, Pakistan)

  • Nikos Economou

    (School of Mineral Resources Engineering, Technical University of Crete, Polytechnioupolis, Kounoupidiana, 731 00 Chania, Crete, Greece)

Abstract

Sustainable groundwater management is essential for water security and human health protection. Fluoride contamination is a serious concern for the sustainable drinking water supply in many parts of Pakistan, including Balochistan, where arid climate conditions and geological formations support the enrichment of fluoride. The toxic nature of fluoride contamination has resulted in negative health impacts on the local population. Conventional geostatistical techniques are usually ineffective to delineate the nonlinear relationships that affect the distribution of fluoride. This study aims to develop a machine learning-driven spatial modelling framework for classifying the spatial distribution of fluoride contamination in groundwater across the study area. The model will help to understand the spatial variability of fluoride contamination and its controlling factors, essential for effective mitigation and early warning systems. Physiochemical elements were used as predictive features in this study, utilizing a unified feature importance framework combining hydrogeochemical analysis, spatial distribution assessment, and ensemble SHAP-based interpretation to identify consistent predictors. Model performance was evaluated using a nested cross-validation framework, followed by validation on an independent geology-informed spatial holdout test set to ensure realistic generalization. Among machine learning models, the Logistic Regression (LR), Support Vector Classifier (SVC), XGBoost (XGB), Decision Tree (DT), Gaussian Naïve Bayes (GNB), and K-Nearest Neighbours (KNN) were evaluated. Support Vector Classifier (SVC) demonstrated a high predictive performance. On the independent spatial holdout dataset, SVC achieved an overall accuracy of 0.75 and an area under the receiver operating characteristic curve (AUC) of 0.821. In addition to classification, a human health risk assessment was conducted using chronic daily intake (CDI) and hazard quotient (HQ) calculations for children and adults, identifying several high-risk water supply schemes. The prediction maps successfully delineated high-risk fluoride points across specific areas, offering a tool for sustainable groundwater management. This study helps to achieve a Sustainable Development Goal (Clean Water and Sanitation, SDG#6) and promotes long-term sustainable planning in water-stressed areas by integrating spatial machine learning mapping and health risk assessment.

Suggested Citation

  • Nabeel Afzal Butt & Khan Muhammad & Waqass Yaseen & Shahid Bashir & Muhammad Younis Khan & Asif Khan & Umar Sadique & Saeed Uddin & Razzaq Abdul Manan & Muhammad Younas & Nikos Economou, 2026. "A Machine Learning-Based Spatial Risk Mapping for Sustainable Groundwater Management Under Fluoride Contamination: A Case Study of Mastung, Balochistan," Sustainability, MDPI, vol. 18(7), pages 1-26, March.
  • Handle: RePEc:gam:jsusta:v:18:y:2026:i:7:p:3328-:d:1909223
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