IDEAS home Printed from https://ideas.repec.org/a/gam/jdataj/v8y2022i1p11-d1018660.html
   My bibliography  Save this article

Natural Language Processing to Extract Information from Portuguese-Language Medical Records

Author

Listed:
  • Naila Camila da Rocha

    (Department of Biostatistics, Institute of Biosciences, Universidade Estadual Paulista (UNESP), Botucatu 18618-970, Brazil)

  • Abner Macola Pacheco Barbosa

    (Medical School, Universidade Estadual Paulista (UNESP), Botucatu 18618-970, Brazil)

  • Yaron Oliveira Schnr

    (Medical School, Universidade Estadual Paulista (UNESP), Botucatu 18618-970, Brazil)

  • Juliana Machado-Rugolo

    (Health Technology Assessment Center (Clinical Hospital of the Botucatu Medical School), Botucatu 18618-970, Brazil)

  • Luis Gustavo Modelli de Andrade

    (Medical School, Universidade Estadual Paulista (UNESP), Botucatu 18618-970, Brazil)

  • José Eduardo Corrente

    (Research Support Office, Fundação para o Desenvolvimento Médico e Hospitalar (FAMESP), Botucatu 18618-687, Brazil)

  • Liciana Vaz de Arruda Silveira

    (Department of Biostatistics, Institute of Biosciences, Universidade Estadual Paulista (UNESP), Botucatu 18618-970, Brazil)

Abstract

Studies that use medical records are often impeded due to the information presented in narrative fields. However, recent studies have used artificial intelligence to extract and process secondary health data from electronic medical records. The aim of this study was to develop a neural network that uses data from unstructured medical records to capture information regarding symptoms, diagnoses, medications, conditions, exams, and treatment. Data from 30,000 medical records of patients hospitalized in the Clinical Hospital of the Botucatu Medical School (HCFMB), São Paulo, Brazil, were obtained, creating a corpus with 1200 clinical texts. A natural language algorithm for text extraction and convolutional neural networks for pattern recognition were used to evaluate the model with goodness-of-fit indices. The results showed good accuracy, considering the complexity of the model, with an F-score of 63.9% and a precision of 72.7%. The patient condition class reached a precision of 90.3% and the medication class reached 87.5%. The proposed neural network will facilitate the detection of relationships between diseases and symptoms and prevalence and incidence, in addition to detecting the identification of clinical conditions, disease evolution, and the effects of prescribed medications.

Suggested Citation

  • Naila Camila da Rocha & Abner Macola Pacheco Barbosa & Yaron Oliveira Schnr & Juliana Machado-Rugolo & Luis Gustavo Modelli de Andrade & José Eduardo Corrente & Liciana Vaz de Arruda Silveira, 2022. "Natural Language Processing to Extract Information from Portuguese-Language Medical Records," Data, MDPI, vol. 8(1), pages 1-15, December.
  • Handle: RePEc:gam:jdataj:v:8:y:2022:i:1:p:11-:d:1018660
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/2306-5729/8/1/11/pdf
    Download Restriction: no

    File URL: https://www.mdpi.com/2306-5729/8/1/11/
    Download Restriction: no
    ---><---

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jdataj:v:8:y:2022:i:1:p:11-:d:1018660. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.